RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 AP3B1O00203 1094 aa17.51■□□□□ 0.39
HMGCS1-206ENST00000511774 SMAD7O15105 426 aaKnown RBP17.51■□□□□ 0.39
HMGCS1-206ENST00000511774 NRDCO43847 1150 aa17.51■□□□□ 0.39
HMGCS1-206ENST00000511774 HNRNPH1P31943 449 aaKnown RBP17.51■□□□□ 0.39
HMGCS1-206ENST00000511774 ANP32AP39687 249 aaKnown RBP17.51■□□□□ 0.39
HMGCS1-206ENST00000511774 KCNJ1P48048 391 aa17.51■□□□□ 0.39
HMGCS1-206ENST00000511774 HSD17B7P56937 341 aa17.51■□□□□ 0.39
HMGCS1-206ENST00000511774 RNF4P78317 190 aa17.51■□□□□ 0.39
HMGCS1-206ENST00000511774 CCZ1BP86790 482 aa17.51■□□□□ 0.39
HMGCS1-206ENST00000511774 CCZ1P86791 482 aaPredicted RBP17.51■□□□□ 0.39
HMGCS1-206ENST00000511774 SLC13A2Q13183 592 aa17.51■□□□□ 0.39
HMGCS1-206ENST00000511774 SP140Q13342 867 aa17.51■□□□□ 0.39
HMGCS1-206ENST00000511774 BMPR2Q13873 1038 aa17.51■□□□□ 0.39
HMGCS1-206ENST00000511774 ELAVL1Q15717 326 aaKnown RBP17.51■□□□□ 0.39
HMGCS1-206ENST00000511774 CASC4Q6P4E1 433 aa17.51■□□□□ 0.39
HMGCS1-206ENST00000511774 FBXW8Q8N3Y1 598 aa17.51■□□□□ 0.39
HMGCS1-206ENST00000511774 SGCZQ96LD1 299 aa17.51■□□□□ 0.39
HMGCS1-206ENST00000511774 WDR83Q9BRX9 315 aaKnown RBP17.51■□□□□ 0.39
HMGCS1-206ENST00000511774 EPB41L4BQ9H329 900 aa17.51■□□□□ 0.39
HMGCS1-206ENST00000511774 TRMT6Q9UJA5 497 aaKnown RBP17.51■□□□□ 0.39
HMGCS1-206ENST00000511774 FBXO5Q9UKT4 447 aa17.51■□□□□ 0.39
HMGCS1-206ENST00000511774 IKZF3Q9UKT9 509 aa17.51■□□□□ 0.39
HMGCS1-206ENST00000511774 ROS1P08922 2347 aa17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 CYR61O00622 381 aa17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 EPPINO95925 133 aa17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 TBX6O95947 436 aaPredicted RBP17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 P04436 131 aa17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 SERPINA6P08185 405 aa17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 PAMP19021 973 aa17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 CDKN2DP55273 166 aa17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 RAB38P57729 211 aa17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 THOC5Q13769 683 aaKnown RBP17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 CSHL1Q14406 222 aa17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 RBM20Q5T481 1227 aaKnown RBP17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 SEL1L2Q5TEA6 688 aa17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 PRAMEF20Q5VT98 475 aa17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 LYPD8Q6UX82 237 aa17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 SYCE1Q8N0S2 351 aa17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 TRPV3Q8NET8 790 aa17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 NEIL3Q8TAT5 605 aa17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 LINGO1Q96FE5 620 aa17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 Q96MF0 132 aa17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 QRFPRQ96P65 431 aa17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 OR8D2Q9GZM6 311 aa17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 ARL15Q9NXU5 204 aa17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 MTRF1LQ9UGC7 380 aaKnown RBP17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 PCDHGB3Q9Y5G1 929 aa17.5■□□□□ 0.39
HMGCS1-206ENST00000511774 CHD3Q12873 2000 aaKnown RBP17.49■□□□□ 0.39
HMGCS1-206ENST00000511774 TRIM64A6NGJ6 449 aa17.49■□□□□ 0.39
HMGCS1-206ENST00000511774 TRIM64BA6NI03 449 aa17.49■□□□□ 0.39
HMGCS1-206ENST00000511774 LRATO95237 230 aa17.49■□□□□ 0.39
HMGCS1-206ENST00000511774 CDK16Q00536 496 aa17.49■□□□□ 0.39
HMGCS1-206ENST00000511774 RBBP5Q15291 538 aaKnown RBP17.49■□□□□ 0.39
HMGCS1-206ENST00000511774 TRIP13Q15645 432 aaPredicted RBP17.49■□□□□ 0.39
HMGCS1-206ENST00000511774 CCNG2Q16589 344 aa17.49■□□□□ 0.39
HMGCS1-206ENST00000511774 ZNF791Q3KP31 576 aaPredicted RBP17.49■□□□□ 0.39
HMGCS1-206ENST00000511774 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.49■□□□□ 0.39
HMGCS1-206ENST00000511774 LRRC25Q8N386 305 aaPredicted RBP17.49■□□□□ 0.39
HMGCS1-206ENST00000511774 TMEM132CQ8N3T6 1108 aa17.49■□□□□ 0.39
HMGCS1-206ENST00000511774 FBXL8Q96CD0 374 aa17.49■□□□□ 0.39
HMGCS1-206ENST00000511774 TSGA10Q9BZW7 698 aa17.49■□□□□ 0.39
HMGCS1-206ENST00000511774 ZNF629Q9UEG4 869 aaPredicted RBP17.49■□□□□ 0.39
HMGCS1-206ENST00000511774 FOXD3Q9UJU5 478 aaPredicted RBP17.49■□□□□ 0.39
HMGCS1-206ENST00000511774 COMMD10Q9Y6G5 202 aa17.49■□□□□ 0.39
HMGCS1-206ENST00000511774 CLCA3PQ9Y6N3 262 aa17.49■□□□□ 0.39
HMGCS1-206ENST00000511774 URADA6NGE7 173 aa17.48■□□□□ 0.39
HMGCS1-206ENST00000511774 GUCA1CO95843 209 aa17.48■□□□□ 0.39
HMGCS1-206ENST00000511774 IFNA16P05015 189 aa17.48■□□□□ 0.39
HMGCS1-206ENST00000511774 GABRB3P28472 473 aa17.48■□□□□ 0.39
HMGCS1-206ENST00000511774 TIMP3P35625 211 aa17.48■□□□□ 0.39
HMGCS1-206ENST00000511774 CRYZQ08257 329 aaKnown RBP17.48■□□□□ 0.39
HMGCS1-206ENST00000511774 ASPHQ12797 758 aa17.48■□□□□ 0.39
HMGCS1-206ENST00000511774 DRICH1Q6PGQ1 229 aaPredicted RBP17.48■□□□□ 0.39
HMGCS1-206ENST00000511774 OPN5Q6U736 354 aa17.48■□□□□ 0.39
HMGCS1-206ENST00000511774 NXPE4Q6UWF7 544 aa17.48■□□□□ 0.39
HMGCS1-206ENST00000511774 MAATS1Q7Z4T9 603 aa17.48■□□□□ 0.39
HMGCS1-206ENST00000511774 TMPRSS11BQ86T26 416 aa17.48■□□□□ 0.39
HMGCS1-206ENST00000511774 KIAA1328Q86T90 577 aa17.48■□□□□ 0.39
HMGCS1-206ENST00000511774 MYO1HQ8N1T3 1032 aa17.48■□□□□ 0.39
HMGCS1-206ENST00000511774 TBC1D19Q8N5T2 526 aa17.48■□□□□ 0.39
HMGCS1-206ENST00000511774 SLC2A12Q8TD20 617 aa17.48■□□□□ 0.39
HMGCS1-206ENST00000511774 ZNF592Q92610 1267 aa17.48■□□□□ 0.39
HMGCS1-206ENST00000511774 MS4A6EQ96DS6 147 aa17.48■□□□□ 0.39
HMGCS1-206ENST00000511774 PELI2Q9HAT8 420 aa17.48■□□□□ 0.39
HMGCS1-206ENST00000511774 ZFP64Q9NPA5 681 aa17.48■□□□□ 0.39
HMGCS1-206ENST00000511774 ACKR4Q9NPB9 350 aa17.48■□□□□ 0.39
HMGCS1-206ENST00000511774 JKAMPQ9P055 326 aa17.48■□□□□ 0.39
HMGCS1-206ENST00000511774 ETHE1O95571 254 aa17.47■□□□□ 0.39
HMGCS1-206ENST00000511774 SAT1P21673 171 aa17.47■□□□□ 0.39
HMGCS1-206ENST00000511774 RGS4P49798 205 aa17.47■□□□□ 0.39
HMGCS1-206ENST00000511774 SORDQ00796 357 aa17.47■□□□□ 0.39
HMGCS1-206ENST00000511774 PIGGQ5H8A4 983 aa17.47■□□□□ 0.39
HMGCS1-206ENST00000511774 LRRC8EQ6NSJ5 796 aa17.47■□□□□ 0.39
HMGCS1-206ENST00000511774 PALM2Q8IXS6 379 aa17.47■□□□□ 0.39
HMGCS1-206ENST00000511774 ZNF595Q8IYB9 648 aa17.47■□□□□ 0.39
HMGCS1-206ENST00000511774 MORN4Q8NDC4 146 aa17.47■□□□□ 0.39
HMGCS1-206ENST00000511774 OR8K3Q8NH51 312 aa17.47■□□□□ 0.39
HMGCS1-206ENST00000511774 PAQR8Q8TEZ7 354 aa17.47■□□□□ 0.39
HMGCS1-206ENST00000511774 ZNF721Q8TF20 911 aa17.47■□□□□ 0.39
HMGCS1-206ENST00000511774 GAL3ST3Q96A11 431 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms