RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 SRRM1Q8IYB3 904 aaKnown RBP13.09□□□□□ -0.31
DDX41-212ENST00000511040 ZNF595Q8IYB9 648 aa13.09□□□□□ -0.31
DDX41-212ENST00000511040 RIBC1Q8N443 379 aaPredicted RBP13.09□□□□□ -0.31
DDX41-212ENST00000511040 MREGQ8N565 214 aa13.09□□□□□ -0.31
DDX41-212ENST00000511040 DNAJB14Q8TBM8 379 aa13.09□□□□□ -0.31
DDX41-212ENST00000511040 M1APQ8TC57 530 aa13.09□□□□□ -0.31
DDX41-212ENST00000511040 ADAMTS18Q8TE60 1221 aa13.09□□□□□ -0.31
DDX41-212ENST00000511040 SELENOMQ8WWX9 145 aa13.09□□□□□ -0.31
DDX41-212ENST00000511040 LMF1Q96S06 567 aa13.09□□□□□ -0.31
DDX41-212ENST00000511040 ZNF382Q96SR6 550 aa13.09□□□□□ -0.31
DDX41-212ENST00000511040 SERPINI1Q99574 410 aa13.09□□□□□ -0.31
DDX41-212ENST00000511040 ZNF717Q9BY31 904 aaPredicted RBP13.09□□□□□ -0.31
DDX41-212ENST00000511040 ILKAPQ9H0C8 392 aaPredicted RBP13.09□□□□□ -0.31
DDX41-212ENST00000511040 GSTO2Q9H4Y5 243 aa13.09□□□□□ -0.31
DDX41-212ENST00000511040 MAP10Q9P2G4 905 aa13.09□□□□□ -0.31
DDX41-212ENST00000511040 TRPS1Q9UHF7 1281 aa13.09□□□□□ -0.31
DDX41-212ENST00000511040 LGALS13Q9UHV8 139 aa13.09□□□□□ -0.31
DDX41-212ENST00000511040 MRPS33Q9Y291 106 aaKnown RBP13.09□□□□□ -0.31
DDX41-212ENST00000511040 B3GNT3Q9Y2A9 372 aa13.09□□□□□ -0.31
DDX41-212ENST00000511040 CLDN16Q9Y5I7 305 aa13.09□□□□□ -0.31
DDX41-212ENST00000511040 A0A0A6YYD5 115 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 SAGE2PA6NJ88 616 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 MANBAO00462 879 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 TMPRSS11DO60235 418 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 MAN1A2O60476 641 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 CTNSO60931 367 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 LDB3O75112 727 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 CPA3P15088 417 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 NAGLUP54802 743 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 HSD17B7P56937 341 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 AP2B1P63010 937 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 ARG2P78540 354 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 LCP2Q13094 533 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 RCN2Q14257 317 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 ABHD17BQ5VST6 288 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 CYP20A1Q6UW02 462 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 IGFL2Q6UWQ7 119 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 GPR180Q86V85 440 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 OR4N5Q8IXE1 308 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 NFAM1Q8NET5 270 aaPredicted RBP13.08□□□□□ -0.32
DDX41-212ENST00000511040 SREK1Q8WXA9 508 aaKnown RBP13.08□□□□□ -0.32
DDX41-212ENST00000511040 APOPT1Q96IL0 206 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 KCNA7Q96RP8 456 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 MRPL1Q9BYD6 325 aaKnown RBP13.08□□□□□ -0.32
DDX41-212ENST00000511040 ROPN1BQ9BZX4 212 aaPredicted RBP13.08□□□□□ -0.32
DDX41-212ENST00000511040 ROPN1Q9HAT0 212 aaPredicted RBP13.08□□□□□ -0.32
DDX41-212ENST00000511040 MMP25Q9NPA2 562 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 SNX6Q9UNH7 406 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 SLC12A4Q9UP95 1085 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 ATG4BQ9Y4P1 393 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 SPACA6W5XKT8 324 aa13.08□□□□□ -0.32
DDX41-212ENST00000511040 ARHGAP10A1A4S6 786 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 GLOD5A6NK44 160 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 WASHC1A8K0Z3 465 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 UBFD1O14562 309 aaKnown RBP13.07□□□□□ -0.32
DDX41-212ENST00000511040 MLYCDO95822 493 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 WDPCPO95876 746 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 IFNA16P05015 189 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 KLK1P06870 262 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 FAM58BPP0C7Q3 252 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 CHN1P15882 459 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 CREB1P16220 341 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 HTR6P50406 440 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 ZNF844Q08AG5 666 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 STX4Q12846 297 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 INPP5JQ15735 1006 aaPredicted RBP13.07□□□□□ -0.32
DDX41-212ENST00000511040 KRT71Q3SY84 523 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 CFAP157Q5JU67 520 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 SCIMPQ6UWF3 145 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 Q6ZS92 163 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 CRLF3Q8IUI8 442 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 C10orf107Q8IVU9 208 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 BEST3Q8N1M1 668 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 ZCCHC7Q8N3Z6 543 aaKnown RBP13.07□□□□□ -0.32
DDX41-212ENST00000511040 CISD2Q8N5K1 135 aaKnown RBP13.07□□□□□ -0.32
DDX41-212ENST00000511040 BANPQ8N9N5 519 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 CPT1CQ8TCG5 803 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 UCN3Q969E3 161 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 ANKRD9Q96BM1 317 aaPredicted RBP13.07□□□□□ -0.32
DDX41-212ENST00000511040 CCDC126Q96EE4 140 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 C19orf60Q96EN9 201 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 NPAS2Q99743 824 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 ALOXE3Q9BYJ1 711 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 SHCBP1LQ9BZQ2 653 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 IQCGQ9H095 443 aaKnown RBP13.07□□□□□ -0.32
DDX41-212ENST00000511040 DDX31Q9H8H2 851 aaKnown RBP13.07□□□□□ -0.32
DDX41-212ENST00000511040 MID1IP1Q9NPA3 183 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 PSD3Q9NYI0 1048 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 STMN3Q9NZ72 180 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 SLC17A7Q9P2U7 560 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 PHF11Q9UIL8 331 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 PLLPQ9Y342 182 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 ASB4Q9Y574 426 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 TIMM22Q9Y584 194 aa13.07□□□□□ -0.32
DDX41-212ENST00000511040 A0A1W2PR48 441 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 DYTNA2CJ06 578 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 FGF17O60258 216 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 SEMA3DO95025 777 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 KRT6AP02538 564 aa13.06□□□□□ -0.32
DDX41-212ENST00000511040 KRT6BP04259 564 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms