RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 SH2D4BQ5SQS7 431 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 ATP1A1-AS1Q5TC04 95 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 TMEM205Q6UW68 189 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 KIRREL2Q6UWL6 708 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 ZNF793Q6ZN11 406 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 COMMD6Q7Z4G1 85 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 CPEB2Q7Z5Q1 589 aaKnown RBP8.6□□□□□ -1.03
NUP54-207ENST00000508583 UBE3DQ7Z6J8 389 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 LAPTM4BQ86VI4 370 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 KBTBD2Q8IY47 623 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 OR11G2Q8NGC1 345 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 FAM76AQ8TAV0 307 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 TM9SF4Q92544 642 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 TTC9Q92623 222 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 SH3GL2Q99962 352 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 PELOQ9BRX2 385 aaKnown RBP8.6□□□□□ -1.03
NUP54-207ENST00000508583 MRPL1Q9BYD6 325 aaKnown RBP8.6□□□□□ -1.03
NUP54-207ENST00000508583 RBCK1Q9BYM8 510 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 AICDAQ9GZX7 198 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 ILKAPQ9H0C8 392 aaPredicted RBP8.6□□□□□ -1.03
NUP54-207ENST00000508583 ZNF700Q9H0M5 742 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 OCEL1Q9H607 264 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 RPF2Q9H7B2 306 aaKnown RBP8.6□□□□□ -1.03
NUP54-207ENST00000508583 LANCL2Q9NS86 450 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 FARSBQ9NSD9 589 aaKnown RBP8.6□□□□□ -1.03
NUP54-207ENST00000508583 GPR83Q9NYM4 423 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 TEKT2Q9UIF3 430 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 MCM8Q9UJA3 840 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 RALYQ9UKM9 306 aaKnown RBP8.6□□□□□ -1.03
NUP54-207ENST00000508583 PSME2Q9UL46 239 aa8.6□□□□□ -1.03
NUP54-207ENST00000508583 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.6□□□□□ -1.03
NUP54-207ENST00000508583 WBP11Q9Y2W2 641 aaKnown RBP8.6□□□□□ -1.03
NUP54-207ENST00000508583 PCDHGA9Q9Y5G4 932 aaKnown RBP8.6□□□□□ -1.03
NUP54-207ENST00000508583 FAM208BQ5VWN6 2430 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 IGHV1-45A0A0A0MS14 117 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 A0A1B0GTL3 188 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 GNG14A0A1W2PPG7 69 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 WDR91A4D1P6 747 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 C4orf51C9J302 202 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 RTCAO00442 366 aaKnown RBP8.59□□□□□ -1.03
NUP54-207ENST00000508583 CYR61O00622 381 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 ATXN7O15265 892 aaPredicted RBP8.59□□□□□ -1.03
NUP54-207ENST00000508583 CTNSO60931 367 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 JRKO75564 520 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 ETHE1O95571 254 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 B3GALT4O96024 378 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 KLK1P06870 262 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 COX6A1P12074 109 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 ITGA3P26006 1051 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 PGDP52209 483 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 SOX8P57073 446 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 OR4D2P58180 307 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 TAS2R50P59544 299 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 PLIN5Q00G26 463 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 STX3Q13277 289 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 HEPACAMQ14CZ8 416 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 VWA5B1Q5TIE3 1220 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 FAM69BQ5VUD6 431 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 KANK2Q63ZY3 851 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 PLAG1Q6DJT9 500 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 FAAH2Q6GMR7 532 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 OR52E8Q6IFG1 317 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 MRM1Q6IN84 353 aaKnown RBP8.59□□□□□ -1.03
NUP54-207ENST00000508583 JMJD6Q6NYC1 403 aaPredicted RBP8.59□□□□□ -1.03
NUP54-207ENST00000508583 ZCCHC23Q6ZST2 131 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 ANKRD37Q7Z713 158 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 SCUBE1Q8IWY4 988 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 DDIASQ8IXT1 998 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 SAMD14Q8IZD0 417 aaPredicted RBP8.59□□□□□ -1.03
NUP54-207ENST00000508583 GALNT16Q8N428 558 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 RNF175Q8N4F7 328 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 C1orf52Q8N6N3 182 aaKnown RBP8.59□□□□□ -1.03
NUP54-207ENST00000508583 FAM47BQ8NA70 645 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 C9orf43Q8TAL5 461 aaPredicted RBP8.59□□□□□ -1.03
NUP54-207ENST00000508583 MGARPQ8TDB4 240 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 CHTF18Q8WVB6 975 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 DYDC1Q8WWB3 177 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 DAZLQ92904 295 aaKnown RBP8.59□□□□□ -1.03
NUP54-207ENST00000508583 MAPKAP1Q9BPZ7 522 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 SLC25A23Q9BV35 468 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 ZNF717Q9BY31 904 aaPredicted RBP8.59□□□□□ -1.03
NUP54-207ENST00000508583 ACPTQ9BZG2 426 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 LHPPQ9H008 270 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 ADAP2Q9NPF8 381 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 SIRT5Q9NXA8 310 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 KCMF1Q9P0J7 381 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 FBXW2Q9UKT8 454 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 TMED5Q9Y3A6 229 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 ZNF451Q9Y4E5 1061 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 TRAF6Q9Y4K3 522 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 TIMM22Q9Y584 194 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 CACNA1GO43497 2377 aa8.59□□□□□ -1.03
NUP54-207ENST00000508583 IGSF10Q6WRI0 2623 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 IGKV3D-11A0A0A0MRZ8 115 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 TCRBV16S1A1N1A0A5B0 115 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 C1orf226A1L170 272 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 NPIPB8E9PQR5 432 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 SLCO1B7G3V0H7 640 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 CDK2AP1O14519 115 aa8.58□□□□□ -1.04
NUP54-207ENST00000508583 PROM1O43490 865 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms