RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 SMIM30A4D0T7 59 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 FAM90A7PA6NKC0 464 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 A8MUI8 341 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 FAM90A22PA8MWA6 464 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 FAM90A12PA8MX19 464 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 FAM90A23PA8MXZ1 464 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 K7EQS6 105 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 HAT1O14929 419 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 CIDEAO60543 219 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 CCDC22O60826 627 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 FGF3P11487 239 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-206ENST00000507875 PNLIPP16233 465 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 ZNF7P17097 686 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-206ENST00000507875 MMP12P39900 470 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 RAC3P60763 192 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 RAB10P61026 200 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 PMP22Q01453 160 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 SQLEQ14534 574 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 PCLAFQ15004 111 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 NCF4Q15080 339 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 PCGF3Q3KNV8 242 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 FAM91A1Q658Y4 838 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 LRRC8EQ6NSJ5 796 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 ZCCHC23Q6ZST2 131 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 ERN2Q76MJ5 926 aaKnown RBP6.8□□□□□ -1.32
CLCN3-206ENST00000507875 RABEPKQ7Z6M1 372 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 CMC1Q7Z7K0 106 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 ARL14Q8N4G2 192 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 SVOPQ8N4V2 548 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 TRAM1L1Q8N609 369 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 OR13C4Q8NGS5 318 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 SLC22A18Q96BI1 424 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 SPACA9Q96E40 222 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-206ENST00000507875 PTCD3Q96EY7 689 aaKnown RBP6.8□□□□□ -1.32
CLCN3-206ENST00000507875 NSL1Q96IY1 281 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 ZNF778Q96MU6 729 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 ZSCAN5AQ9BUG6 496 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 NUSAP1Q9BXS6 441 aaKnown RBP6.8□□□□□ -1.32
CLCN3-206ENST00000507875 WWP1Q9H0M0 922 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 ZDHHC4Q9NPG8 344 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 PRSS16Q9NQE7 514 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 OR6C2Q9NZP2 312 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 TMEM216Q9P0N5 145 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 COPG2Q9UBF2 871 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 SLC25A10Q9UBX3 287 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-206ENST00000507875 PLXND1Q9Y4D7 1925 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 H0YIV9 168 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 NDUFS3O75489 264 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 SRP72O76094 671 aaKnown RBP6.79□□□□□ -1.32
CLCN3-206ENST00000507875 AP2A2O94973 939 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 ACAA1P09110 424 aaPredicted RBP6.79□□□□□ -1.32
CLCN3-206ENST00000507875 CALB2P22676 271 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 AVPR2P30518 371 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 SLC1A6P48664 564 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 SPINT3P49223 89 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 AQP5P55064 265 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 DPTQ07507 201 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 PEX6Q13608 980 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 SLC9B1Q4ZJI4 515 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 LCE2AQ5TA79 106 aaPredicted RBP6.79□□□□□ -1.32
CLCN3-206ENST00000507875 DEGS2Q6QHC5 323 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 USP30Q70CQ3 517 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 CLEC14AQ86T13 490 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 ALYREFQ86V81 257 aaKnown RBP6.79□□□□□ -1.32
CLCN3-206ENST00000507875 KBTBD6Q86V97 674 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 LONP2Q86WA8 852 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 C10orf107Q8IVU9 208 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 KIRREL3Q8IZU9 778 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 RBFAQ8N0V3 343 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 ATXN7L3BQ96GX2 97 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 PRR11Q96HE9 360 aaPredicted RBP6.79□□□□□ -1.32
CLCN3-206ENST00000507875 RPP25Q9BUL9 199 aaKnown RBP6.79□□□□□ -1.32
CLCN3-206ENST00000507875 TRIM2Q9C040 744 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 NMUR2Q9GZQ4 415 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 CTDSP1Q9GZU7 261 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 ZBTB26Q9HCK0 441 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 C8orf4Q9NR00 106 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 RXFP3Q9NSD7 469 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 ARL8BQ9NVJ2 186 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 C19orf73Q9NVV2 129 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 WNT16Q9UBV4 365 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 MARCOQ9UEW3 520 aaPredicted RBP6.79□□□□□ -1.32
CLCN3-206ENST00000507875 CNOT6Q9ULM6 557 aaKnown RBP6.79□□□□□ -1.32
CLCN3-206ENST00000507875 FZD4Q9ULV1 537 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 ACOT9Q9Y305 439 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 PTRH2Q9Y3E5 179 aaKnown RBP6.79□□□□□ -1.32
CLCN3-206ENST00000507875 KCNE2Q9Y6J6 123 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 CLCA3PQ9Y6N3 262 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 A0A096LPK6 155 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 A0A0G2JNJ9 132 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 A0A1B0GWJ7 208 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 OR2W5A6NFC9 320 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 SOCS6O14544 535 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 TRIM24O15164 1050 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 LDLRAD4O15165 306 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 ATG13O75143 517 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 CLN5O75503 358 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 OR2C1O95371 312 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 CLPTM1O96005 669 aa6.79□□□□□ -1.32
CLCN3-206ENST00000507875 SERPINE1P05121 402 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms