RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 A0A1W2PNV4 684 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 A0A1W2PP18 115 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 LRRC14BA6NHZ5 514 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 LRRC53A6NM62 1247 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 ZNF839A8K0R7 811 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 H0Y3Z8 333 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 TMPRSS2O15393 492 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 CLOCKO15516 846 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 OR10H2O60403 315 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 PROSCO94903 275 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 VENTXO95231 258 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 C1QAP02745 245 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 KRT1P04264 644 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 CYP1A2P05177 515 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 SLC35G6P0C7Q6 338 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 CCDC166P0CW27 439 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 RNH1P13489 461 aaKnown RBP6.56□□□□□ -1.36
VCAN-207ENST00000507162 PECAM1P16284 738 aaPredicted RBP6.56□□□□□ -1.36
VCAN-207ENST00000507162 ALOX12P18054 663 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 TBXA2RP21731 343 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 PSMB4P28070 264 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 FOXN2P32314 431 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 HNF4AP41235 474 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 RPL21P46778 160 aaKnown RBP6.56□□□□□ -1.36
VCAN-207ENST00000507162 NR2C2P49116 596 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 COMPP49747 757 aaPredicted RBP6.56□□□□□ -1.36
VCAN-207ENST00000507162 GZMKP49863 264 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 NUDT6P53370 316 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 SKP1P63208 163 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 EEF1A1P68104 462 aaKnown RBP6.56□□□□□ -1.36
VCAN-207ENST00000507162 ASPHQ12797 758 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 NFKBIBQ15653 356 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 DPCR1Q3MIW9 517 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 EIPR1Q53HC9 387 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.56□□□□□ -1.36
VCAN-207ENST00000507162 EEF1A1P5Q5VTE0 462 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 CLEC2AQ6UVW9 174 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 MILR1Q7Z6M3 343 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 LDB1Q86U70 411 aaPredicted RBP6.56□□□□□ -1.36
VCAN-207ENST00000507162 WFDC8Q8IUA0 241 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 TC2NQ8N9U0 490 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 ZNF740Q8NDX6 193 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 FAM13CQ8NE31 585 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 OR10H5Q8NGA6 315 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 REPS1Q96D71 796 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 STARD4Q96DR4 205 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 GORASP1Q9BQQ3 440 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 DOHHQ9BU89 302 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 OR8D2Q9GZM6 311 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 GBA3Q9H227 469 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 MANSC1Q9H8J5 431 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 PROK2Q9HC23 129 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 ADAP2Q9NPF8 381 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 PIH1D1Q9NWS0 290 aaKnown RBP6.56□□□□□ -1.36
VCAN-207ENST00000507162 ELOVL5Q9NYP7 299 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 AIPL1Q9NZN9 384 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 CTTNBP2NLQ9P2B4 639 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 CLCA3PQ9Y6N3 262 aa6.56□□□□□ -1.36
VCAN-207ENST00000507162 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 TMEM89A2RUT3 159 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 FRG2CA6NGY1 282 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 E7ENX8 843 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 TGFBR3LH3BV60 316 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 H7C0C1 242 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 CST8O60676 142 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 TNFSF13O75888 250 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 GOT2P00505 430 aaKnown RBP6.55□□□□□ -1.36
VCAN-207ENST00000507162 TGFAP01135 160 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 THBDP07204 575 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 DANCRP0C864 163 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 ZNF888P0CJ79 500 aaPredicted RBP6.55□□□□□ -1.36
VCAN-207ENST00000507162 TNNI3P19429 210 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 PTNP21246 168 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 CCKARP32238 428 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 HSD17B2P37059 387 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 PPARGP37231 505 aaPredicted RBP6.55□□□□□ -1.36
VCAN-207ENST00000507162 ATP5OP48047 213 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 NAGLUP54802 743 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 EIF3BP55884 814 aaKnown RBP6.55□□□□□ -1.36
VCAN-207ENST00000507162 PRSS12P56730 875 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 RNF4P78317 190 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 SIRPAP78324 504 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 SLC13A2Q13183 592 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 ARHGAP19Q14CB8 494 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 TERF2Q15554 542 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 EXOC3L2Q2M3D2 409 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 PIGGQ5H8A4 983 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 LCE2AQ5TA79 106 aaPredicted RBP6.55□□□□□ -1.36
VCAN-207ENST00000507162 ITPRIPL1Q6GPH6 555 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 VWA1Q6PCB0 445 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 CLEC17AQ6ZS10 378 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 P4HA3Q7Z4N8 544 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 CLNKQ7Z7G1 428 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 GRAMD2AQ8IUY3 354 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 TMEM132CQ8N3T6 1108 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 AFAP1L2Q8N4X5 818 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 LRRC17Q8N6Y2 441 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 ZNF321PQ8N8H1 164 aa6.55□□□□□ -1.36
VCAN-207ENST00000507162 PPHLN1Q8NEY8 458 aaKnown RBP6.55□□□□□ -1.36
VCAN-207ENST00000507162 OR5L2Q8NGL0 311 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms