RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 RNF175Q8N4F7 328 aa12.37□□□□□ -0.43
DDX41-206ENST00000506965 OR2L5Q8NG80 312 aa12.37□□□□□ -0.43
DDX41-206ENST00000506965 ZNF721Q8TF20 911 aa12.37□□□□□ -0.43
DDX41-206ENST00000506965 ANKRD9Q96BM1 317 aaPredicted RBP12.37□□□□□ -0.43
DDX41-206ENST00000506965 F2RL3Q96RI0 385 aa12.37□□□□□ -0.43
DDX41-206ENST00000506965 SMC6Q96SB8 1091 aa12.37□□□□□ -0.43
DDX41-206ENST00000506965 MAPKAP1Q9BPZ7 522 aa12.37□□□□□ -0.43
DDX41-206ENST00000506965 NPLQ9BXD5 320 aaPredicted RBP12.37□□□□□ -0.43
DDX41-206ENST00000506965 CXXC4Q9H2H0 198 aa12.37□□□□□ -0.43
DDX41-206ENST00000506965 CAB39LQ9H9S4 337 aa12.37□□□□□ -0.43
DDX41-206ENST00000506965 KCNJ16Q9NPI9 418 aa12.37□□□□□ -0.43
DDX41-206ENST00000506965 TIMMDC1Q9NPL8 285 aa12.37□□□□□ -0.43
DDX41-206ENST00000506965 HPF1Q9NWY4 346 aa12.37□□□□□ -0.43
DDX41-206ENST00000506965 VTI1BQ9UEU0 232 aa12.37□□□□□ -0.43
DDX41-206ENST00000506965 CORO1CQ9ULV4 474 aaPredicted RBP12.37□□□□□ -0.43
DDX41-206ENST00000506965 KCNE2Q9Y6J6 123 aa12.37□□□□□ -0.43
DDX41-206ENST00000506965 NCF1BA6NI72 391 aaPredicted RBP12.36□□□□□ -0.43
DDX41-206ENST00000506965 LRRC3CA6NJW4 275 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 NCF1CA8MVU1 366 aaPredicted RBP12.36□□□□□ -0.43
DDX41-206ENST00000506965 CLEC3AO75596 197 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 C1QAP02745 245 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 NCF1P14598 390 aaPredicted RBP12.36□□□□□ -0.43
DDX41-206ENST00000506965 ACVR2AP27037 513 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 PIGAP37287 484 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 WNT3P56703 355 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 SKP1P63208 163 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 RNF4P78317 190 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 PPP1R7Q15435 360 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 TGFBIQ15582 683 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 OR4D1Q15615 310 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 ZNF585AQ6P3V2 769 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 POMZP3Q6PJE2 187 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 TMEM200AQ86VY9 491 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 ZNF595Q8IYB9 648 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 RELL2Q8NC24 303 aaPredicted RBP12.36□□□□□ -0.43
DDX41-206ENST00000506965 NAXEQ8NCW5 288 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 OR5M3Q8NGP4 307 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 SLC2A12Q8TD20 617 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 ASB15Q8WXK1 588 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 CCT6BQ92526 530 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 SORBS1Q9BX66 1292 aaKnown RBP12.36□□□□□ -0.43
DDX41-206ENST00000506965 TRIM54Q9BYV2 358 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 NT5DC2Q9H857 520 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 PPANQ9NQ55 473 aaKnown RBP12.36□□□□□ -0.43
DDX41-206ENST00000506965 MOCS1Q9NZB8 636 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 KCNN3Q9UGI6 736 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 ASIC3Q9UHC3 531 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 ERVK-11Q9UQG0 969 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 ATG4BQ9Y4P1 393 aa12.36□□□□□ -0.43
DDX41-206ENST00000506965 MED12LQ86YW9 2145 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 FAM221AA4D161 298 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 URADA6NGE7 173 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 WASHC1A8K0Z3 465 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 CXorf49A8MYA2 514 aaPredicted RBP12.35□□□□□ -0.43
DDX41-206ENST00000506965 CLDN4O14493 209 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 B3GALT2O43825 422 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 CTNSO60931 367 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 SH3BGRLO75368 114 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 PRKRAO75569 313 aaKnown RBP12.35□□□□□ -0.43
DDX41-206ENST00000506965 CTAG2O75638 210 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 IGKV3-11P04433 115 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 STXBP1P61764 594 aaKnown RBP12.35□□□□□ -0.43
DDX41-206ENST00000506965 PLGLB1Q02325 96 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 DOC2AQ14183 400 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 FRG1Q14331 258 aaKnown RBP12.35□□□□□ -0.43
DDX41-206ENST00000506965 HYAL4Q2M3T9 481 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 OR4N5Q8IXE1 308 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 C9orf40Q8IXQ3 194 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 TBC1D19Q8N5T2 526 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 ARMC2Q8NEN0 867 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 ANKRD7Q92527 254 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 WDR34Q96EX3 536 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 EGFL8Q99944 293 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 ZNF559Q9BR84 538 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 ALOXE3Q9BYJ1 711 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 OR8D2Q9GZM6 311 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 REXO4Q9GZR2 422 aaKnown RBP12.35□□□□□ -0.43
DDX41-206ENST00000506965 GSX1Q9H4S2 264 aaPredicted RBP12.35□□□□□ -0.43
DDX41-206ENST00000506965 DLL4Q9NR61 685 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 CCM2LQ9NUG4 571 aaPredicted RBP12.35□□□□□ -0.43
DDX41-206ENST00000506965 SNX12Q9UMY4 172 aa12.35□□□□□ -0.43
DDX41-206ENST00000506965 MTO1Q9Y2Z2 717 aaKnown RBP12.35□□□□□ -0.43
DDX41-206ENST00000506965 ATP6AP2A0A1C7CYW4 349 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 A0A1W2PS29 197 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 AQP7O14520 342 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 PHGDHO43175 533 aaKnown RBP12.34□□□□□ -0.43
DDX41-206ENST00000506965 FGF17O60258 216 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 ATP6AP2O75787 350 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 LRATO95237 230 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 CLPSP04118 112 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 CD1EP15812 388 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 GNAZP19086 355 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 CNR1P21554 472 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 GGT5P36269 586 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 HSPA7P48741 367 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 MTTPP55157 894 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 IGLV3-21P80748 117 aaPredicted RBP12.34□□□□□ -0.43
DDX41-206ENST00000506965 BMPR2Q13873 1038 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 E2F2Q14209 437 aa12.34□□□□□ -0.43
DDX41-206ENST00000506965 ZNF791Q3KP31 576 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms