RNA–Protein interactions for RNA: ENST00000506873.5

KLHL3-208, Transcript of kelch like family member 3, human

TSL 2

Gene KLHL3, Length 1,883 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHL3-208	ENST00000506873	R3HCC1L	Q7Z5L2	792 aa	Known RBP	13.9	□□□□□ -0.18
KLHL3-208	ENST00000506873	CAMKMT	Q7Z624	323 aa		13.9	□□□□□ -0.18
KLHL3-208	ENST00000506873	AGBL5	Q8NDL9	886 aa		13.9	□□□□□ -0.18
KLHL3-208	ENST00000506873	MIEF2	Q96C03	454 aa		13.9	□□□□□ -0.18
KLHL3-208	ENST00000506873	PPCDC	Q96CD2	204 aa		13.9	□□□□□ -0.18
KLHL3-208	ENST00000506873	KLHL29	Q96CT2	875 aa		13.9	□□□□□ -0.18
KLHL3-208	ENST00000506873	MTERF3	Q96E29	417 aa		13.9	□□□□□ -0.18
KLHL3-208	ENST00000506873	MMAB	Q96EY8	250 aa	Predicted RBP	13.9	□□□□□ -0.18
KLHL3-208	ENST00000506873	NDC1	Q9BTX1	674 aa		13.9	□□□□□ -0.18
KLHL3-208	ENST00000506873	C1orf21	Q9H246	121 aa		13.9	□□□□□ -0.18
KLHL3-208	ENST00000506873	FANCE	Q9HB96	536 aa		13.9	□□□□□ -0.18
KLHL3-208	ENST00000506873	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
KLHL3-208	ENST00000506873	RAPGEFL1	Q9UHV5	662 aa		13.9	□□□□□ -0.18
KLHL3-208	ENST00000506873	LEF1	Q9UJU2	399 aa	Predicted RBP	13.9	□□□□□ -0.18
KLHL3-208	ENST00000506873	PRSS51	A0A1B0GVH4	220 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	EFCAB7	A8K855	629 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	BBIP1	A8MTZ0	92 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	CHST10	O43529	356 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	TIAF1	O95411	115 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	NSA2	O95478	260 aa	Known RBP	13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	ITGAX	P20702	1163 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	GSTM5	P46439	218 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	MAT1A	Q00266	395 aa	Known RBP	13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	SYT16	Q17RD7	645 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	PWWP2B	Q6NUJ5	590 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	DHRS13	Q6UX07	377 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	DLEU7	Q6UYE1	221 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	GLRX5	Q86SX6	157 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	CA13	Q8N1Q1	262 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	TTC29	Q8NA56	475 aa	Predicted RBP	13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	PCYOX1L	Q8NBM8	494 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	SLC38A9	Q8NBW4	561 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	STARD8	Q92502	1023 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	CIDEC	Q96AQ7	238 aa	Predicted RBP	13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	CSF3R	Q99062	836 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	SLC39A3	Q9BRY0	314 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	SERHL	Q9NQF3	203 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	SLC6A13	Q9NSD5	602 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	LYAR	Q9NX58	379 aa	Known RBP	13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	NDOR1	Q9UHB4	597 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	CES1P1	Q9UKY3	287 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	MAPRE3	Q9UPY8	281 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	CLCA2	Q9UQC9	943 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	PCDHGA1	Q9Y5H4	931 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	MAU2	Q9Y6X3	613 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	C1orf226	A1L170	272 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	CYR61	O00622	381 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	GSC2	O15499	205 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	CPN2	P22792	545 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	OR1D4	P47884	311 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	GTF2A1	P52655	376 aa	Predicted RBP	13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	COQ5	Q5HYK3	327 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	KIAA2013	Q8IYS2	634 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	CLECL1	Q8IZS7	167 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	DPP10	Q8N608	796 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	BMPER	Q8N8U9	685 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	EXOSC8	Q96B26	276 aa	Known RBP	13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	CTRC	Q99895	268 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	INPP5K	Q9BT40	448 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	FAIM2	Q9BWQ8	316 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	NPL	Q9BXD5	320 aa	Predicted RBP	13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	BHLHE41	Q9C0J9	482 aa	Predicted RBP	13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	LRMDA	Q9H2I8	198 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	LYRM4	Q9HD34	91 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	MS4A12	Q9NXJ0	267 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	TAS2R7	Q9NYW3	318 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	HCN3	Q9P1Z3	774 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	RARRES3	Q9UL19	164 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	PCDHA9	Q9Y5H5	950 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	CELSR3	Q9NYQ7	3312 aa		13.89	□□□□□ -0.19
KLHL3-208	ENST00000506873	GSN	P06396	782 aa		13.88	□□□□□ -0.19
KLHL3-208	ENST00000506873	CCKBR	P32239	447 aa		13.88	□□□□□ -0.19
KLHL3-208	ENST00000506873	RPL3	P39023	403 aa	Known RBP	13.88	□□□□□ -0.19
KLHL3-208	ENST00000506873	BUD31	P41223	144 aa	Predicted RBP	13.88	□□□□□ -0.19
KLHL3-208	ENST00000506873	AVPR1B	P47901	424 aa		13.88	□□□□□ -0.19
KLHL3-208	ENST00000506873	HNRNPF	P52597	415 aa	Known RBP	13.88	□□□□□ -0.19
KLHL3-208	ENST00000506873	ACTN3	Q08043	901 aa	Predicted RBP	13.88	□□□□□ -0.19
KLHL3-208	ENST00000506873	ERV3-1	Q14264	604 aa		13.88	□□□□□ -0.19
KLHL3-208	ENST00000506873	CAPRIN1	Q14444	709 aa	Known RBP	13.88	□□□□□ -0.19
KLHL3-208	ENST00000506873	ISX	Q2M1V0	245 aa		13.88	□□□□□ -0.19
KLHL3-208	ENST00000506873	C6orf10	Q5SRN2	563 aa		13.88	□□□□□ -0.19
KLHL3-208	ENST00000506873	C1orf189	Q5VU69	101 aa		13.88	□□□□□ -0.19
KLHL3-208	ENST00000506873	PPP1R3B	Q86XI6	285 aa		13.88	□□□□□ -0.19
KLHL3-208	ENST00000506873	DEFB107A	Q8IZN7	70 aa		13.88	□□□□□ -0.19
KLHL3-208	ENST00000506873	FAM47B	Q8NA70	645 aa		13.88	□□□□□ -0.19
KLHL3-208	ENST00000506873	TMEM52	Q8NDY8	209 aa		13.88	□□□□□ -0.19
KLHL3-208	ENST00000506873	LRRC58	Q96CX6	371 aa		13.88	□□□□□ -0.19
KLHL3-208	ENST00000506873	CADM1	Q9BY67	442 aa	Known RBP	13.88	□□□□□ -0.19
KLHL3-208	ENST00000506873	RPF2	Q9H7B2	306 aa	Known RBP	13.88	□□□□□ -0.19
KLHL3-208	ENST00000506873	ATAD3A	Q9NVI7	634 aa		13.88	□□□□□ -0.19
KLHL3-208	ENST00000506873	PHF11	Q9UIL8	331 aa		13.88	□□□□□ -0.19
KLHL3-208	ENST00000506873	UTS2R	Q9UKP6	389 aa		13.88	□□□□□ -0.19
KLHL3-208	ENST00000506873	DCHS1	Q96JQ0	3298 aa		13.87	□□□□□ -0.19
KLHL3-208	ENST00000506873	SPAAR	A0A1B0GVQ0	90 aa		13.87	□□□□□ -0.19
KLHL3-208	ENST00000506873		A0A1W2PS29	197 aa		13.87	□□□□□ -0.19
KLHL3-208	ENST00000506873		H0YIG0	161 aa		13.87	□□□□□ -0.19
KLHL3-208	ENST00000506873	TM4SF5	O14894	197 aa		13.87	□□□□□ -0.19
KLHL3-208	ENST00000506873	POLR1C	O15160	346 aa	Predicted RBP	13.87	□□□□□ -0.19
KLHL3-208	ENST00000506873	TBX19	O60806	448 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms