RNA–Protein interactions for RNA: ENST00000506747.5

CLOCK-205, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 1,337 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-205ENST00000506747 CFAP36Q96G28 342 aa3.38□□□□□ -1.87
CLOCK-205ENST00000506747 PRICKLE1Q96MT3 831 aaPredicted RBP3.38□□□□□ -1.87
CLOCK-205ENST00000506747 TMEM237Q96Q45 408 aa3.38□□□□□ -1.87
CLOCK-205ENST00000506747 SYT15Q9BQS2 421 aa3.38□□□□□ -1.87
CLOCK-205ENST00000506747 FGFBP2Q9BYJ0 223 aa3.38□□□□□ -1.87
CLOCK-205ENST00000506747 CXXC4Q9H2H0 198 aa3.38□□□□□ -1.87
CLOCK-205ENST00000506747 ZDHHC18Q9NUE0 388 aa3.38□□□□□ -1.87
CLOCK-205ENST00000506747 DDX28Q9NUL7 540 aaKnown RBP3.38□□□□□ -1.87
CLOCK-205ENST00000506747 ANO10Q9NW15 660 aa3.38□□□□□ -1.87
CLOCK-205ENST00000506747 ZNF319Q9P2F9 582 aa3.38□□□□□ -1.87
CLOCK-205ENST00000506747 KLK11Q9UBX7 282 aa3.38□□□□□ -1.87
CLOCK-205ENST00000506747 LNPEPQ9UIQ6 1025 aa3.38□□□□□ -1.87
CLOCK-205ENST00000506747 EXOGQ9Y2C4 368 aaKnown RBP3.38□□□□□ -1.87
CLOCK-205ENST00000506747 RPH3AQ9Y2J0 694 aaPredicted RBP3.38□□□□□ -1.87
CLOCK-205ENST00000506747 TRBV5-4A0A0C4DH59 114 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 TRBV2A0A0J9YWF9 115 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 SH3PXD2BA1X283 911 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 SOCS3O14543 225 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 LRP3O75074 770 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 PRDM1O75626 825 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 GPX3P22352 226 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 AHCYP23526 432 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 ACP1P24666 158 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 NT5C2P49902 561 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 HUNKP57058 714 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 FCN2Q15485 313 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 PARP10Q53GL7 1025 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 LYPLAL1Q5VWZ2 237 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 SNRNP48Q6IEG0 339 aaKnown RBP3.37□□□□□ -1.87
CLOCK-205ENST00000506747 NEPROQ6NW34 567 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 NEK5Q6P3R8 708 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 GDPGP1Q6ZNW5 385 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 ADAMTSL2Q86TH1 951 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 ZFAND4Q86XD8 727 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 MRPL43Q8N983 215 aaKnown RBP3.37□□□□□ -1.87
CLOCK-205ENST00000506747 NUP37Q8NFH4 326 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 RPLP0P6Q8NHW5 317 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 ATP8B4Q8TF62 1192 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 LIPHQ8WWY8 451 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 ZNF560Q96MR9 790 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 OPRPNQ99935 248 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-205ENST00000506747 AGPAT1Q99943 283 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 JPH2Q9BR39 696 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-205ENST00000506747 FAM213AQ9BRX8 229 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 MTIF3Q9H2K0 278 aaKnown RBP3.37□□□□□ -1.87
CLOCK-205ENST00000506747 FAM212BQ9NTI7 297 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-205ENST00000506747 NDE1Q9NXR1 346 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 TSPAN16Q9UKR8 245 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 DNPEPQ9ULA0 475 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 MRPS2Q9Y399 296 aaKnown RBP3.37□□□□□ -1.87
CLOCK-205ENST00000506747 SNED1Q8TER0 1413 aa3.37□□□□□ -1.87
CLOCK-205ENST00000506747 A0A1W2PPR1 153 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 K7EQG2 157 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 SEC22BO75396 215 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 RNF224P0DH78 156 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 PDHA2P29803 388 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 TNFRSF4P43489 277 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 ZFP36L2P47974 494 aaKnown RBP3.36□□□□□ -1.87
CLOCK-205ENST00000506747 LUMP51884 338 aaPredicted RBP3.36□□□□□ -1.87
CLOCK-205ENST00000506747 NDST2P52849 883 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 BPIFB3P59826 476 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 PMP22Q01453 160 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 HSPA14Q0VDF9 509 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 FAM189A2Q15884 450 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 WSCD2Q2TBF2 565 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 MOGAT2Q3SYC2 334 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 WLSQ5T9L3 541 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 PRAMEF7Q5VXH5 474 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 RAB12Q6IQ22 244 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 ZER1Q7Z7L7 766 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 ARL10Q8N8L6 244 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 TMEM185AQ8NFB2 350 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 OR9Q2Q8NGE9 314 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 OR4A16Q8NH70 328 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 EXOC6Q8TAG9 804 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 HCAR2Q8TDS4 363 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 SLC13A3Q8WWT9 602 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 PNPLA2Q96AD5 504 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 CAPNS2Q96L46 248 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 NAP1L3Q99457 506 aaPredicted RBP3.36□□□□□ -1.87
CLOCK-205ENST00000506747 SPXQ9BT56 116 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 SYT11Q9BT88 431 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 S100A14Q9HCY8 104 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 SPHK2Q9NRA0 654 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 ZCCHC3Q9NUD5 404 aaKnown RBP3.36□□□□□ -1.87
CLOCK-205ENST00000506747 ACOXLQ9NUZ1 547 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 PLEK2Q9NYT0 353 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 EXOC7Q9UPT5 735 aa3.36□□□□□ -1.87
CLOCK-205ENST00000506747 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.35□□□□□ -1.87
CLOCK-205ENST00000506747 ZNF724A8MTY0 619 aa3.35□□□□□ -1.87
CLOCK-205ENST00000506747 TRAFD1O14545 582 aaPredicted RBP3.35□□□□□ -1.87
CLOCK-205ENST00000506747 MTRF1O75570 445 aaKnown RBP3.35□□□□□ -1.87
CLOCK-205ENST00000506747 OR6B1O95007 311 aa3.35□□□□□ -1.87
CLOCK-205ENST00000506747 FHP07954 510 aa3.35□□□□□ -1.87
CLOCK-205ENST00000506747 SERPINF2P08697 491 aa3.35□□□□□ -1.87
CLOCK-205ENST00000506747 CPA3P15088 417 aa3.35□□□□□ -1.87
CLOCK-205ENST00000506747 AREGP15514 252 aa3.35□□□□□ -1.87
CLOCK-205ENST00000506747 UGT1A4P22310 534 aa3.35□□□□□ -1.87
CLOCK-205ENST00000506747 CLK1P49759 484 aaKnown RBP3.35□□□□□ -1.87
CLOCK-205ENST00000506747 CRYBA2P53672 197 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms