RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 PRAMEF10O60809 474 aa16.34■□□□□ 0.21
SQSTM1-211ENST00000506690 ZNF865P0CJ78 1059 aaPredicted RBP16.34■□□□□ 0.21
SQSTM1-211ENST00000506690 CBSLP0DN79 551 aa16.34■□□□□ 0.21
SQSTM1-211ENST00000506690 JUPP14923 745 aa16.34■□□□□ 0.21
SQSTM1-211ENST00000506690 PTGS2P35354 604 aa16.34■□□□□ 0.21
SQSTM1-211ENST00000506690 CBSP35520 551 aa16.34■□□□□ 0.21
SQSTM1-211ENST00000506690 PURAQ00577 322 aaKnown RBP16.34■□□□□ 0.21
SQSTM1-211ENST00000506690 SCARB2Q14108 478 aa16.34■□□□□ 0.21
SQSTM1-211ENST00000506690 FAM110CQ1W6H9 321 aa16.34■□□□□ 0.21
SQSTM1-211ENST00000506690 FLYWCH1Q4VC44 716 aa16.34■□□□□ 0.21
SQSTM1-211ENST00000506690 PRAMEF19Q5SWL8 479 aa16.34■□□□□ 0.21
SQSTM1-211ENST00000506690 ANXA8L1Q5VT79 327 aa16.34■□□□□ 0.21
SQSTM1-211ENST00000506690 METAP1DQ6UB28 335 aaPredicted RBP16.34■□□□□ 0.21
SQSTM1-211ENST00000506690 NPLOC4Q8TAT6 608 aa16.34■□□□□ 0.21
SQSTM1-211ENST00000506690 UROC1Q96N76 676 aa16.34■□□□□ 0.21
SQSTM1-211ENST00000506690 TMEM43Q9BTV4 400 aa16.34■□□□□ 0.21
SQSTM1-211ENST00000506690 IL26Q9NPH9 171 aa16.34■□□□□ 0.21
SQSTM1-211ENST00000506690 TRPV2Q9Y5S1 764 aa16.34■□□□□ 0.21
SQSTM1-211ENST00000506690 ENPP4Q9Y6X5 453 aa16.34■□□□□ 0.21
SQSTM1-211ENST00000506690 M0QZ92 97 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 CD160O95971 181 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 ITGALP20701 1170 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 FEN1P39748 380 aaKnown RBP16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 RBBP4Q09028 425 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 MFSD13AQ14CX5 517 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 P2RY14Q15391 338 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 SF1Q15637 639 aaKnown RBP16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 LEXMQ3ZCV2 418 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 CNIH2Q6PI25 160 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 USP30Q70CQ3 517 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 WDR53Q7Z5U6 358 aaPredicted RBP16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 GPR65Q8IYL9 337 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 TTC9BQ8N6N2 239 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 TMEM203Q969S6 136 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 GFM1Q96RP9 751 aaKnown RBP16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 ACAT2Q9BWD1 397 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 CCSER2Q9H7U1 834 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 ZNF106Q9H2Y7 1883 aaKnown RBP16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 ACSL4O60488 711 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 ZNF623O75123 536 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 OSMP13725 252 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 RHCEP18577 417 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 TNNI3P19429 210 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 CASP9P55211 416 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 ARF5P84085 180 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 RGS1Q08116 209 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 ILKQ13418 452 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 RIN1Q13671 783 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 SF3A2Q15428 464 aaKnown RBP16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 CRB2Q5IJ48 1285 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 C12orf73Q69YU5 71 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 TMIGD1Q6UXZ0 262 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 ZNF852Q6ZMS4 543 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 GHDCQ8N2G8 530 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 ZNF680Q8NEM1 530 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 NFKBIDQ8NI38 313 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 TMEM163Q8TC26 289 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 TSSK6Q9BXA6 273 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 SPATA6Q9NWH7 488 aaPredicted RBP16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 KCTD5Q9NXV2 234 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 MRPL39Q9NYK5 338 aaKnown RBP16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 AFF4Q9UHB7 1163 aaKnown RBP16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 POLHQ9Y253 713 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 SLC22A14Q9Y267 594 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 CDH10Q9Y6N8 788 aa16.33■□□□□ 0.2
SQSTM1-211ENST00000506690 SNTNA6NMZ2 147 aa16.32■□□□□ 0.2
SQSTM1-211ENST00000506690 TSC22D2O75157 780 aa16.32■□□□□ 0.2
SQSTM1-211ENST00000506690 IDSP22304 550 aa16.32■□□□□ 0.2
SQSTM1-211ENST00000506690 PTBP1P26599 531 aaKnown RBP eCLIP16.32■□□□□ 0.2
SQSTM1-211ENST00000506690 EEF1A2Q05639 463 aaKnown RBP16.32■□□□□ 0.2
SQSTM1-211ENST00000506690 ZNF33BQ06732 778 aa16.32■□□□□ 0.2
SQSTM1-211ENST00000506690 MGAT3Q09327 533 aa16.32■□□□□ 0.2
SQSTM1-211ENST00000506690 NFE2L1Q14494 772 aa16.32■□□□□ 0.2
SQSTM1-211ENST00000506690 PLK5Q496M5 336 aa16.32■□□□□ 0.2
SQSTM1-211ENST00000506690 GCNT6Q5T4J0 391 aa16.32■□□□□ 0.2
SQSTM1-211ENST00000506690 LYPLAL1Q5VWZ2 237 aa16.32■□□□□ 0.2
SQSTM1-211ENST00000506690 UBE2R2Q712K3 238 aaPredicted RBP16.32■□□□□ 0.2
SQSTM1-211ENST00000506690 ZNF598Q86UK7 904 aaKnown RBP16.32■□□□□ 0.2
SQSTM1-211ENST00000506690 SLC37A3Q8NCC5 494 aa16.32■□□□□ 0.2
SQSTM1-211ENST00000506690 OR4A15Q8NGL6 344 aa16.32■□□□□ 0.2
SQSTM1-211ENST00000506690 OR52P1PQ8NH57 321 aa16.32■□□□□ 0.2
SQSTM1-211ENST00000506690 SLC12A9Q9BXP2 914 aa16.32■□□□□ 0.2
SQSTM1-211ENST00000506690 KCND3Q9UK17 655 aa16.32■□□□□ 0.2
SQSTM1-211ENST00000506690 LOC102723532A0A0G2JNH3 316 aa16.31■□□□□ 0.2
SQSTM1-211ENST00000506690 SMIM30A4D0T7 59 aa16.31■□□□□ 0.2
SQSTM1-211ENST00000506690 FAM227AF5H4B4 570 aa16.31■□□□□ 0.2
SQSTM1-211ENST00000506690 INMT-MINDY4F8WBC2 141 aa16.31■□□□□ 0.2
SQSTM1-211ENST00000506690 SGK494L7N484 410 aa16.31■□□□□ 0.2
SQSTM1-211ENST00000506690 STK25O00506 426 aa16.31■□□□□ 0.2
SQSTM1-211ENST00000506690 FABP7O15540 132 aa16.31■□□□□ 0.2
SQSTM1-211ENST00000506690 OAZ2O95190 189 aa16.31■□□□□ 0.2
SQSTM1-211ENST00000506690 RECKO95980 971 aa16.31■□□□□ 0.2
SQSTM1-211ENST00000506690 ADAP00813 363 aa16.31■□□□□ 0.2
SQSTM1-211ENST00000506690 RHOCP08134 193 aa16.31■□□□□ 0.2
SQSTM1-211ENST00000506690 HNMTP50135 292 aa16.31■□□□□ 0.2
SQSTM1-211ENST00000506690 ACSM2AQ08AH3 577 aa16.31■□□□□ 0.2
SQSTM1-211ENST00000506690 CHIT1Q13231 466 aa16.31■□□□□ 0.2
SQSTM1-211ENST00000506690 ACSM2BQ68CK6 577 aa16.31■□□□□ 0.2
SQSTM1-211ENST00000506690 ANKRD54Q6NXT1 300 aa16.31■□□□□ 0.2
SQSTM1-211ENST00000506690 ANGPTL8Q6UXH0 198 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms