RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 KHDRBS2Q5VWX1 349 aaKnown RBP8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 LIPJQ5W064 366 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 SLC25A25Q6KCM7 469 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 KLC3Q6P597 504 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 GFRALQ6UXV0 394 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 GALNTL5Q7Z4T8 443 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 SIAH3Q8IW03 269 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 CTAGE4Q8IX94 777 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 HORMAD2Q8N7B1 307 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 L3MBTL4Q8NA19 623 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 TMEM178AQ8NBL3 297 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 THAP3Q8WTV1 239 aaPredicted RBP8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 DCAKDQ8WVC6 231 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 ZNF592Q92610 1267 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 NCLNQ969V3 563 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 CMTM7Q96FZ5 175 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 VMP1Q96GC9 406 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 FRMD6Q96NE9 622 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 MAPKAP1Q9BPZ7 522 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 ZNF717Q9BY31 904 aaPredicted RBP8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 DEFB126Q9BYW3 111 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 DMRT3Q9NQL9 472 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 KLHL1Q9NR64 748 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 PNO1Q9NRX1 252 aaKnown RBP8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 ZNF358Q9NW07 568 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 LRFN1Q9P244 771 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 VTI1BQ9UEU0 232 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 ADGRE2Q9UHX3 823 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 ZNF180Q9UJW8 692 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 CENPEQ02224 2701 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 MYO7BQ6PIF6 2116 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 TRBV11-1A0A0K0K1C0 115 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 A0A1B0GUH1 482 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 PLPP1O14494 284 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 FCHO1O14526 889 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 PRKNO60260 465 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 SLC25A12O75746 678 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 UNC5CO95185 931 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 SIX3O95343 332 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 INHBAP08476 426 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 RBP1P09455 135 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 PCNAP12004 261 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 COL6A2P12110 1019 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 EEF1DP29692 281 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 SSR2P43308 183 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 PIK3CGP48736 1102 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 CYB561P49447 251 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 PER3P56645 1201 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 OC90Q02509 493 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 GTF2H2Q13888 395 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 ZRSR2Q15696 482 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 AP5B1Q2VPB7 878 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 C1QL3Q5VWW1 255 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 OR4C11Q6IEV9 310 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 MRM1Q6IN84 353 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 GTF2H2CQ6P1K8 395 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 CHSY3Q70JA7 882 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 GOLGA7Q7Z5G4 137 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 CLNKQ7Z7G1 428 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 TMEM132CQ8N3T6 1108 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 ZCCHC7Q8N3Z6 543 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 RNF175Q8N4F7 328 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 HUS1BQ8NHY5 278 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 WDR20Q8TBZ3 569 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 PTPMT1Q8WUK0 201 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 IFT81Q8WYA0 676 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 ANKRD9Q96BM1 317 aaPredicted RBP8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 GPR137Q96N19 417 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 ALOXE3Q9BYJ1 711 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 VPS11Q9H270 941 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 OR51B5Q9H339 312 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 IPPKQ9H8X2 491 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 PSD3Q9NYI0 1048 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 CPSF2Q9P2I0 782 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 SEC14L3Q9UDX4 400 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 PPT2Q9UMR5 302 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 PCDHGA11Q9Y5H2 935 aa8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 TNPO3Q9Y5L0 923 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-209ENST00000506632 ITPR2Q14571 2701 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 TEX15Q9BXT5 2789 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 A0A087WUV0 522 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 TRIM49D1C9J1S8 452 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 STX16-NPEPL1H3BU86 382 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 FOXE1O00358 373 aaPredicted RBP8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 OR7A17O14581 309 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 STX16O14662 325 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 FGF17O60258 216 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 ZG16O60844 167 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 LDB3O75112 727 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 SH3BGRLO75368 114 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 ITGA10O75578 1167 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 KRT38O76015 456 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 ABHD2P08910 425 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 SBK3P0C264 359 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 CNTFP26441 200 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 GCAP28676 217 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 CA7P43166 264 aa8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 HNRNPH2P55795 449 aaKnown RBP8.44□□□□□ -1.06
PDLIM5-209ENST00000506632 RPS13P62277 151 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms