RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 GPRIN3Q6ZVF9 776 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 RPS27LQ71UM5 84 aaKnown RBP6.84□□□□□ -1.31
GYPB-206ENST00000506516 CPEB2Q7Z5Q1 589 aaKnown RBP6.84□□□□□ -1.31
GYPB-206ENST00000506516 HPS6Q86YV9 775 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 KBTBD2Q8IY47 623 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 ZNF595Q8IYB9 648 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 ACOT4Q8N9L9 421 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 FDCSPQ8NFU4 85 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 WDR20Q8TBZ3 569 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 METTL6Q8TCB7 284 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 SELENOMQ8WWX9 145 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 TM9SF4Q92544 642 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 C8orf44Q96CB5 159 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 PTCHD1Q96NR3 888 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 QRFPRQ96P65 431 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 ZIM3Q96PE6 472 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 BBC3Q96PG8 261 aaPredicted RBP6.84□□□□□ -1.31
GYPB-206ENST00000506516 TMEM237Q96Q45 408 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 FRG2BQ96QU4 278 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 ZNF382Q96SR6 550 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 TUBB6Q9BUF5 446 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 TRIM55Q9BYV6 548 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 GSX2Q9BZM3 304 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 AICDAQ9GZX7 198 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 ZNF700Q9H0M5 742 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 ZNF160Q9HCG1 818 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 LYRM4Q9HD34 91 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 DMRT3Q9NQL9 472 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 ZNF71Q9NQZ8 489 aaPredicted RBP6.84□□□□□ -1.31
GYPB-206ENST00000506516 LANCL2Q9NS86 450 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 RIC8BQ9NVN3 520 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 MS4A12Q9NXJ0 267 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 GPR83Q9NYM4 423 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 C5AR2Q9P296 337 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 EMCNQ9ULC0 261 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 PPT2Q9UMR5 302 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 DAPP1Q9UN19 280 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 ZNF451Q9Y4E5 1061 aa6.84□□□□□ -1.31
GYPB-206ENST00000506516 MGAQ8IWI9 3026 aa6.84□□□□□ -1.32
GYPB-206ENST00000506516 CACNA1BQ00975 2339 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 PKD1L2Q7Z442 2459 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 IGHV1-45A0A0A0MS14 117 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 A0A1W2PQ72 361 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 ARHGAP10A1A4S6 786 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 GOLGA6L10A6NI86 522 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 FAM227AF5H4B4 570 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 SAP18O00422 153 aaKnown RBP6.83□□□□□ -1.32
GYPB-206ENST00000506516 PPP6CO00743 305 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 TRIM13O60858 407 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 CTNSO60931 367 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 SH3BGRLO75368 114 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 ULK1O75385 1050 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 SPAG7O75391 227 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 TNFRSF21O75509 655 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 CRCPO75575 148 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 CEACAM4O75871 244 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 SASH3O75995 380 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 OR4F21O95013 312 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 ESRRBO95718 433 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 PDYNP01213 254 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 ENO1P06733 434 aaKnown RBP6.83□□□□□ -1.32
GYPB-206ENST00000506516 COX6A1P12074 109 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 HMOX2P30519 316 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 LIM2P55344 173 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 HSD17B7P56937 341 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 RAB38P57729 211 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 OR4D2P58180 307 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 RHAGQ02094 409 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 EEF1A2Q05639 463 aaKnown RBP6.83□□□□□ -1.32
GYPB-206ENST00000506516 ZNF33BQ06732 778 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 NFATC3Q12968 1075 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 TRAF3Q13114 568 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 BIKQ13323 160 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 MYBPC3Q14896 1274 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 EXT1Q16394 746 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 SGO1Q5FBB7 561 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 BEND6Q5SZJ8 279 aaPredicted RBP6.83□□□□□ -1.32
GYPB-206ENST00000506516 AGAP7PQ5VUJ5 663 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 JMJD6Q6NYC1 403 aaPredicted RBP6.83□□□□□ -1.32
GYPB-206ENST00000506516 LETMD1Q6P1Q0 360 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 ASB18Q6ZVZ8 466 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 PAGE2Q7Z2X7 111 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 UBE3DQ7Z6J8 389 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 ANKRD37Q7Z713 158 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 EXOC3L1Q86VI1 746 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 TMEM151BQ8IW70 566 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 ZCCHC7Q8N3Z6 543 aaKnown RBP6.83□□□□□ -1.32
GYPB-206ENST00000506516 RNF175Q8N4F7 328 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 CDYL2Q8N8U2 506 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 TEX19Q8NA77 164 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 TCP10LQ8TDR4 215 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 THOC3Q96J01 351 aaKnown RBP6.83□□□□□ -1.32
GYPB-206ENST00000506516 CNDP1Q96KN2 507 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 AGAP4Q96P64 663 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 FAM111AQ96PZ2 611 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 LPAR4Q99677 370 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 SMAD5Q99717 465 aaKnown RBP6.83□□□□□ -1.32
GYPB-206ENST00000506516 SLC29A3Q9BZD2 475 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 SEMA4CQ9C0C4 833 aa6.83□□□□□ -1.32
GYPB-206ENST00000506516 LHPPQ9H008 270 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms