RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 FRMD6-AS1P0C7T7 363 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 GHRP10912 638 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 RBMS1P29558 406 aaKnown RBP2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 PPP2R1AP30153 589 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 STIP1P31948 543 aaKnown RBP2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 CEACAM8P31997 349 aaPredicted RBP2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 EPHX2P34913 555 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 NSFP46459 744 aaKnown RBP2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 ASMTP46597 345 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 RABIFP47224 123 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 GPC3P51654 580 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 CLCN4P51793 760 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 CNN1P51911 297 aaKnown RBP2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 HNRNPFP52597 415 aaKnown RBP2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 LBX1P52954 281 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 GMFBP60983 142 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 SRP54P61011 504 aaKnown RBP2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 GPR17Q13304 367 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 KEAP1Q14145 624 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 RBM39Q14498 530 aaKnown RBP2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 IZUMO4Q1ZYL8 232 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 ZC2HC1CQ53FD0 456 aaPredicted RBP2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 XKR6Q5GH73 641 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 FGD3Q5JSP0 725 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 PSRC1Q6PGN9 363 aaPredicted RBP2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 DHRS11Q6UWP2 260 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 PRSS57Q6UWY2 283 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 RBM43Q6ZSC3 357 aaKnown RBP2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 COX8CQ7Z4L0 72 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 TAF8Q7Z7C8 310 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 ELMOD2Q8IZ81 293 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 RNF149Q8NC42 400 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 TMEM185AQ8NFB2 350 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 SLC24A4Q8NFF2 622 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 OR52E1Q8NGJ3 308 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 SAP25Q8TEE9 199 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 SEPT8Q92599 483 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 HAS2Q92819 552 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 ZNF354BQ96LW1 612 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 KCNK16Q96T55 309 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 LRRC2Q9BYS8 371 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 PITPNM3Q9BZ71 974 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 WWTR1Q9GZV5 400 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 SHARPINQ9H0F6 387 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 CARD9Q9H257 536 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 DPEP2Q9H4A9 486 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 GPN1Q9HCN4 374 aaPredicted RBP2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 KCNMB3Q9NPA1 279 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 TAS2R3Q9NYW6 316 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 DNPEPQ9ULA0 475 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 ERVK-19Q9WJR5 959 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 SH3GLB1Q9Y371 365 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 PCDHGB1Q9Y5G3 927 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 COLEC10Q9Y6Z7 277 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 AFDNP55196 1824 aaKnown RBP2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 SNED1Q8TER0 1413 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 LTBP1Q14766 1721 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 BCORQ6W2J9 1755 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 IGHV4-61A0A0C4DH41 118 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 MACROD2A1Z1Q3 448 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 CCDC162PA2VCL2 907 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 FPGTO14772 594 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 NDC80O14777 642 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 TEX28O15482 410 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 EXTL3O43909 919 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 KIF5CO60282 957 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 KRT33AO76009 404 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 TSHBP01222 138 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 IGHV4-59P01825 116 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 PGK2P07205 417 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 GSTA2P09210 222 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 SNHG28P0DPA3 235 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 CYP3A5P20815 502 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 ACP1P24666 158 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 SRD5A2P31213 254 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 KIF5BP33176 963 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 EPS15P42566 896 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 DNA2P51530 1060 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 CDR2Q01850 454 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 POU3F1Q03052 451 aaPredicted RBP2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 SGCGQ13326 291 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 CDH18Q13634 790 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 TRIM29Q14134 588 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 GIT2Q14161 759 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 GK2Q14410 553 aaPredicted RBP2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 PTPN14Q15678 1187 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 HSP90AA5PQ58FG0 334 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 SLC25A53Q5H9E4 307 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 WDR38Q5JTN6 314 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 OR6B2Q6IFH4 312 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 DLEU7Q6UYE1 221 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 WDR88Q6ZMY6 472 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 MACC1Q6ZN28 852 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 C1orf186Q6ZWK4 172 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 SLC24A5Q71RS6 500 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 ADAMTSL2Q86TH1 951 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 RBM23Q86U06 439 aaKnown RBP2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 PIGZQ86VD9 579 aa2.89□□□□□ -1.95
TRAPPC11-205ENST00000506426 STHQ8IWL8 128 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms