RNA–Protein interactions for RNA: ENST00000505874.1

LINC00616-202, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-202ENST00000505874 RPP38P78345 283 aaKnown RBP2.78□□□□□ -1.96
LINC00616-202ENST00000505874 ZNF600Q6ZNG1 722 aa2.78□□□□□ -1.96
LINC00616-202ENST00000505874 TMEM182Q6ZP80 229 aaPredicted RBP2.78□□□□□ -1.96
LINC00616-202ENST00000505874 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
LINC00616-202ENST00000505874 CCDC71Q8IV32 467 aaPredicted RBP2.78□□□□□ -1.96
LINC00616-202ENST00000505874 ZNF274Q96GC6 653 aaPredicted RBP2.78□□□□□ -1.96
LINC00616-202ENST00000505874 FER1L6-AS2Q96M78 137 aa2.78□□□□□ -1.96
LINC00616-202ENST00000505874 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.78□□□□□ -1.96
LINC00616-202ENST00000505874 CLEC4EQ9ULY5 219 aa2.78□□□□□ -1.96
LINC00616-202ENST00000505874 CCL27Q9Y4X3 112 aa2.78□□□□□ -1.96
LINC00616-202ENST00000505874 TOP2AP11388 1531 aaKnown RBP2.78□□□□□ -1.97
LINC00616-202ENST00000505874 OR5H15A6NDH6 313 aa2.77□□□□□ -1.97
LINC00616-202ENST00000505874 ZNF724A8MTY0 619 aa2.77□□□□□ -1.97
LINC00616-202ENST00000505874 NEDD8-MDP1E9PL57 170 aa2.77□□□□□ -1.97
LINC00616-202ENST00000505874 P2RX6O15547 441 aa2.77□□□□□ -1.97
LINC00616-202ENST00000505874 LYNP07948 512 aa2.77□□□□□ -1.97
LINC00616-202ENST00000505874 ALDH3B1P43353 468 aa2.77□□□□□ -1.97
LINC00616-202ENST00000505874 CEACAM7Q14002 265 aa2.77□□□□□ -1.97
LINC00616-202ENST00000505874 PLPP4Q5VZY2 271 aa2.77□□□□□ -1.97
LINC00616-202ENST00000505874 TXNRD3NBQ6F5E7 133 aa2.77□□□□□ -1.97
LINC00616-202ENST00000505874 CGB2Q6NT52 195 aa2.77□□□□□ -1.97
LINC00616-202ENST00000505874 SPATA21Q7Z572 469 aa2.77□□□□□ -1.97
LINC00616-202ENST00000505874 PHLDB2Q86SQ0 1253 aa2.77□□□□□ -1.97
LINC00616-202ENST00000505874 MEX3DQ86XN8 651 aaKnown RBP2.77□□□□□ -1.97
LINC00616-202ENST00000505874 KIF18AQ8NI77 898 aa2.77□□□□□ -1.97
LINC00616-202ENST00000505874 OCC1Q8TAD7 63 aa2.77□□□□□ -1.97
LINC00616-202ENST00000505874 GPR148Q8TDV2 347 aa2.77□□□□□ -1.97
LINC00616-202ENST00000505874 ZBED6CLQ96FA7 236 aaPredicted RBP2.77□□□□□ -1.97
LINC00616-202ENST00000505874 MAPKAP1Q9BPZ7 522 aa2.77□□□□□ -1.97
LINC00616-202ENST00000505874 TRIM7Q9C029 511 aa2.77□□□□□ -1.97
LINC00616-202ENST00000505874 ZBP1Q9H171 429 aa2.77□□□□□ -1.97
LINC00616-202ENST00000505874 ASB8Q9H765 288 aa2.77□□□□□ -1.97
LINC00616-202ENST00000505874 MED17Q9NVC6 651 aa2.77□□□□□ -1.97
LINC00616-202ENST00000505874 CLIC5Q9NZA1 410 aa2.77□□□□□ -1.97
LINC00616-202ENST00000505874 TSPY2A6NKD2 308 aa2.76□□□□□ -1.97
LINC00616-202ENST00000505874 E2F3O00716 465 aa2.76□□□□□ -1.97
LINC00616-202ENST00000505874 SCO2O43819 266 aa2.76□□□□□ -1.97
LINC00616-202ENST00000505874 SKILP12757 684 aa2.76□□□□□ -1.97
LINC00616-202ENST00000505874 GPX3P22352 226 aa2.76□□□□□ -1.97
LINC00616-202ENST00000505874 ACKR3P25106 362 aa2.76□□□□□ -1.97
LINC00616-202ENST00000505874 RGRP47804 291 aa2.76□□□□□ -1.97
LINC00616-202ENST00000505874 OR3A1P47881 315 aa2.76□□□□□ -1.97
LINC00616-202ENST00000505874 CETN1Q12798 172 aa2.76□□□□□ -1.97
LINC00616-202ENST00000505874 GSG1Q2KHT4 349 aa2.76□□□□□ -1.97
LINC00616-202ENST00000505874 HERC4Q5GLZ8 1057 aaPredicted RBP2.76□□□□□ -1.97
LINC00616-202ENST00000505874 LIPJQ5W064 366 aa2.76□□□□□ -1.97
LINC00616-202ENST00000505874 FAM91A1Q658Y4 838 aa2.76□□□□□ -1.97
LINC00616-202ENST00000505874 RPUSD3Q6P087 351 aaKnown RBP2.76□□□□□ -1.97
LINC00616-202ENST00000505874 NLRP14Q86W24 1093 aa2.76□□□□□ -1.97
LINC00616-202ENST00000505874 CREBRFQ8IUR6 639 aa2.76□□□□□ -1.97
LINC00616-202ENST00000505874 ZNF525Q8N782 197 aa2.76□□□□□ -1.97
LINC00616-202ENST00000505874 SAMD12Q8N8I0 201 aa2.76□□□□□ -1.97
LINC00616-202ENST00000505874 RIT1Q92963 219 aa2.76□□□□□ -1.97
LINC00616-202ENST00000505874 PRMT1Q99873 361 aaKnown RBP2.76□□□□□ -1.97
LINC00616-202ENST00000505874 UBA5Q9GZZ9 404 aa2.76□□□□□ -1.97
LINC00616-202ENST00000505874 LMAN1LQ9HAT1 526 aa2.76□□□□□ -1.97
LINC00616-202ENST00000505874 S100A14Q9HCY8 104 aa2.76□□□□□ -1.97
LINC00616-202ENST00000505874 RALGAPA1Q6GYQ0 2036 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 A0A0B4J203 849 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 CCDC162PA2VCL2 907 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 TSC22D2O75157 780 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 GBAP04062 536 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 KRT3P12035 628 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 ADRA2CP18825 462 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 PPP2R1AP30153 589 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 NPY4RP50391 375 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 KRTAP10-1P60331 282 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 GPR50Q13585 617 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 TOMM20Q15388 145 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 SPOUT1Q5T280 376 aaKnown RBP2.75□□□□□ -1.97
LINC00616-202ENST00000505874 SHEQ5VZ18 495 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 ZNF776Q68DI1 518 aaPredicted RBP2.75□□□□□ -1.97
LINC00616-202ENST00000505874 C16orf54Q6UWD8 224 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 ZNF730Q6ZMV8 503 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 KRT74Q7RTS7 529 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 CCDC186Q7Z3E2 898 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 SLC22A18ASQ8N1D0 253 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 TMEM99Q8N816 258 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 CLEC1AQ8NC01 280 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 BEST4Q8NFU0 473 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 C8orf46Q8TAG6 207 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 SEPT8Q92599 483 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 EXOC4Q96A65 974 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 RBM18Q96H35 190 aaKnown RBP2.75□□□□□ -1.97
LINC00616-202ENST00000505874 SIGLEC12Q96PQ1 595 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 INPP5KQ9BT40 448 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 NT5DC2Q9H857 520 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 CHCHD3Q9NX63 227 aaKnown RBP2.75□□□□□ -1.97
LINC00616-202ENST00000505874 TMED7Q9Y3B3 224 aa2.75□□□□□ -1.97
LINC00616-202ENST00000505874 CCDC88BA6NC98 1476 aa2.74□□□□□ -1.97
LINC00616-202ENST00000505874 A0A087WV48 116 aa2.74□□□□□ -1.97
LINC00616-202ENST00000505874 TNFSF11O14788 317 aa2.74□□□□□ -1.97
LINC00616-202ENST00000505874 MCF2LO15068 1137 aa2.74□□□□□ -1.97
LINC00616-202ENST00000505874 RPN1P04843 607 aaKnown RBP2.74□□□□□ -1.97
LINC00616-202ENST00000505874 PTAFRP25105 342 aa2.74□□□□□ -1.97
LINC00616-202ENST00000505874 MDH2P40926 338 aaKnown RBP2.74□□□□□ -1.97
LINC00616-202ENST00000505874 MEOX2P50222 304 aa2.74□□□□□ -1.97
LINC00616-202ENST00000505874 NAGLUP54802 743 aa2.74□□□□□ -1.97
LINC00616-202ENST00000505874 C17orf58Q2M2W7 97 aa2.74□□□□□ -1.97
LINC00616-202ENST00000505874 CACUL1Q86Y37 369 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms