RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 ERI3O43414 337 aaKnown RBP7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 HSPA4LO95757 839 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 FBLP22087 321 aaKnown RBP7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 SOX11P35716 441 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 STT3AP46977 705 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 SKP1P63208 163 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 FUT7Q11130 342 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 UNQ6494/PRO21346Q6UXR6 183 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 GPR180Q86V85 440 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 ZNF248Q8NDW4 579 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 OR5T3Q8NGG3 340 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 OR8K3Q8NH51 312 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 ELP5Q8TE02 316 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 OR52B2Q96RD2 323 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 SORBS1Q9BX66 1292 aaKnown RBP7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 MRPL1Q9BYD6 325 aaKnown RBP7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 CHST8Q9H2A9 424 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 SERHLQ9NQF3 203 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 TEX10Q9NXF1 929 aaPredicted RBP7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 AHSPQ9NZD4 102 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 NOP53Q9NZM5 478 aaKnown RBP7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 DHCR7Q9UBM7 475 aaKnown RBP7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 CTSFQ9UBX1 484 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 ZNF282Q9UDV7 671 aaPredicted RBP7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 A0A088AWK7 358 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 A0A0A6YYC8 382 aaPredicted RBP7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 C1orf226A1L170 272 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 TCP11X1B4DZS4 312 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 I3L1I5 382 aaPredicted RBP7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 K7ENP7 123 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 FFAR3O14843 346 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 SCAMP2O15127 329 aaKnown RBP7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 GPR42O15529 346 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 B3GALT2O43825 422 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 RNH1P13489 461 aaKnown RBP7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 ZNF10P21506 573 aaPredicted RBP7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 TACR1P25103 407 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 IL12AP29459 219 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 SERPINB3P29508 390 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 TLE3Q04726 772 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 DUSP2Q05923 314 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 MAP4K2Q12851 820 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 DNASE1L3Q13609 305 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 COQ5Q5HYK3 327 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 TMEM81Q6P7N7 255 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 INO80CQ6PI98 192 aaPredicted RBP7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 C1orf52Q8N6N3 182 aaKnown RBP7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 TBC1D20Q96BZ9 403 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 SH2D2AQ9NP31 389 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 NECTIN3Q9NQS3 549 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 ACSS1Q9NUB1 689 aaPredicted RBP7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 HS3ST3B1Q9Y662 390 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 A0A087WV62 115 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 RDH16O75452 317 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 DDAH2O95865 285 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 MMP11P24347 488 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 HMOX2P30519 316 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 HMGCS1Q01581 520 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 SLAMF1Q13291 335 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 BIRC2Q13490 618 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 LSM12Q3MHD2 195 aaKnown RBP7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 SNAP47Q5SQN1 464 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 FUNDC1Q8IVP5 155 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 UCN3Q969E3 161 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 CHMP6Q96FZ7 201 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 BHLHE41Q9C0J9 482 aaPredicted RBP7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 CENPHQ9H3R5 247 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 SIRT3Q9NTG7 399 aaPredicted RBP7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 PADI1Q9ULC6 663 aa7.78□□□□□ -1.16
CDC42SE2-208ENST00000505065 LINC00032P0C843 101 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 IL1RNP18510 177 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 RBMS1P29558 406 aaKnown RBP7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 ASMTP46597 345 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 PHC1P78364 1004 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 RCAN2Q14206 197 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 PRICKLE4Q2TBC4 344 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 ZNF385BQ569K4 471 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 OR52E8Q6IFG1 317 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 BNC2Q6ZN30 1099 aaPredicted RBP7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 CRLF3Q8IUI8 442 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 GPR135Q8IZ08 494 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 M1APQ8TC57 530 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 STT3BQ8TCJ2 826 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 PTPMT1Q8WUK0 201 aaPredicted RBP7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 IP6K3Q96PC2 410 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 EPN3Q9H201 632 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 RIC8BQ9NVN3 520 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 DOCK10Q96BY6 2186 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 TEX51A0A1B0GUA7 166 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 PCDH7O60245 1069 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 SNX3O60493 162 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 B3GALT4O96024 378 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 HPP00738 406 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 PCNAP12004 261 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 Q0VFX4 171 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 TMEM164Q5U3C3 297 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 TTLL10Q6ZVT0 673 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 ZNF615Q8N8J6 731 aa7.77□□□□□ -1.17
CDC42SE2-208ENST00000505065 CCDC63Q8NA47 563 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms