RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 KRTAP1-3Q8IUG1 177 aa6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 P3H2Q8IVL5 708 aa6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 SCUBE1Q8IWY4 988 aa6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 ULK2Q8IYT8 1036 aa6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 LIX1Q8N485 282 aa6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 ZNF321PQ8N8H1 164 aa6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 ANKRD53Q8N9V6 530 aa6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 TMEM52Q8NDY8 209 aa6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 TNIP2Q8NFZ5 429 aa6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 LINC01560Q8TB33 94 aa6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 FAR2Q96K12 515 aa6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 RUNDC3BQ96NL0 473 aa6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 OR4K3Q96R72 315 aa6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 CSF3RQ99062 836 aa6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 SH3GL2Q99962 352 aa6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 AIF1LQ9BQI0 150 aa6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 TSPY26PQ9H489 355 aa6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 PRM3Q9NNZ6 103 aa6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 FBXO5Q9UKT4 447 aa6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 DYRK1BQ9Y463 629 aa6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 ATG4BQ9Y4P1 393 aa6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 MAD1L1Q9Y6D9 718 aa6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 COMMD10Q9Y6G5 202 aa6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 CLCA3PQ9Y6N3 262 aa6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 FN1P02751 2386 aaKnown RBP6.37□□□□□ -1.39
NPIPB3-203ENST00000504841 KDM4EB2RXH2 506 aaPredicted RBP6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 INAFM1C9JVW0 142 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 EIF3FO00303 357 aaPredicted RBP6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 ERI3O43414 337 aaKnown RBP6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 B3GALT2O43825 422 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 SUSD5O60279 629 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 HCN1O60741 890 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 ZNF354AO60765 605 aaPredicted RBP6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 HAUS5O94927 633 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 LRATO95237 230 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 RFPL3SP0C7P2 107 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 EPXP11678 715 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 CD53P19397 219 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 TPSB2P20231 275 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 CERS1P27544 350 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 AHRP35869 848 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 PGGT1BP53609 377 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 PLA2G16P53816 162 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 HSD17B7P56937 341 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 RAB38P57729 211 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 STXBP1P61764 594 aaKnown RBP6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 KCNJ2P63252 427 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 SARNPP82979 210 aaKnown RBP6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 PPP2R2BQ00005 443 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 ID2Q02363 134 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 ASPHQ12797 758 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 GPS1Q13098 491 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 TPSAB1Q15661 275 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 ELAVL1Q15717 326 aaKnown RBP6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 ACSF3Q4G176 576 aaPredicted RBP6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 RBM20Q5T481 1227 aaKnown RBP6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 ANKRD22Q5VYY1 191 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 SHEQ5VZ18 495 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 DUPD1Q68J44 220 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 UGT3A1Q6NUS8 523 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 PAQR3Q6TCH7 311 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 OPN5Q6U736 354 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 CXXC5Q7LFL8 322 aaKnown RBP6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 STRA8Q7Z7C7 330 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 KIF18BQ86Y91 864 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 CIARTQ8N365 385 aaPredicted RBP6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 TMEM132CQ8N3T6 1108 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 FBXW8Q8N3Y1 598 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 GOLM1Q8NBJ4 401 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 TRPV3Q8NET8 790 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 OR4K1Q8NGD4 311 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 OR56A3Q8NH54 315 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 DAZLQ92904 295 aaKnown RBP6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 GAL3ST3Q96A11 431 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 TRIM54Q9BYV2 358 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 AICDAQ9GZX7 198 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 EPB41L4BQ9H329 900 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 ZNF703Q9H7S9 590 aaPredicted RBP6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 PLEKHF2Q9H8W4 249 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 IARS2Q9NSE4 1012 aaKnown RBP6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 BOKQ9UMX3 212 aaPredicted RBP6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 PPIEQ9UNP9 301 aaKnown RBP6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 MRPS33Q9Y291 106 aaKnown RBP6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 CLDN16Q9Y5I7 305 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 EML6Q6ZMW3 1958 aa6.36□□□□□ -1.39
NPIPB3-203ENST00000504841 FLNAP21333 2647 aaKnown RBP6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 ARHGAP21Q5T5U3 1957 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 FBN3Q75N90 2809 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 ZCWPW2A0A1B0GU75 182 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 A0A1W2PPR1 153 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 LRRC3CA6NJW4 275 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 C17orf105B2RV13 164 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 ARHGEF9O43307 516 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 IL2RAP01589 272 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 HRGP04196 525 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 SERPINA6P08185 405 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 SMIM10L1P0DMW3 83 aa6.35□□□□□ -1.39
NPIPB3-203ENST00000504841 HNRNPH1P31943 449 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms