RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 CELF2-AS1Q8N7Q2 184 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 CHST14Q8NCH0 376 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 OR8J1Q8NGP2 316 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 GLYATL1Q969I3 302 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 TMEM169Q96HH4 297 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 RIOK2Q9BVS4 552 aaKnown RBP14.29□□□□□ -0.12
SNF8-203ENST00000504000 UCK2Q9BZX2 261 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 TP63Q9H3D4 680 aaPredicted RBP14.29□□□□□ -0.12
SNF8-203ENST00000504000 A4GALTQ9NPC4 353 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 ITM2CQ9NQX7 267 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 NDUFB11Q9NX14 153 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 SPATA7Q9P0W8 599 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 SRRDQ9UH36 339 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 TMCC3Q9ULS5 477 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 SLC6A14Q9UN76 642 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 STUB1Q9UNE7 303 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 RBMX2Q9Y388 322 aaKnown RBP14.29□□□□□ -0.12
SNF8-203ENST00000504000 MAP4K5Q9Y4K4 846 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 V9GYH0 126 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 TET1Q8NFU7 2136 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 PIPSLA2A3N6 862 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 HYKKA2RU49 373 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 CENPBD1B2RD01 187 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 LEFTY2O00292 366 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 URODP06132 367 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 POU2F1P14859 743 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 ETV3P41162 512 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 CRYBB2P43320 205 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 RECQLP46063 649 aaPredicted RBP14.29□□□□□ -0.12
SNF8-203ENST00000504000 BDKRB1P46663 353 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 CTSCP53634 463 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 TBPL1P62380 186 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 CYP4F8P98187 520 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 MLLT11Q13015 90 aaPredicted RBP14.29□□□□□ -0.12
SNF8-203ENST00000504000 SLBPQ14493 270 aaKnown RBP eCLIP14.29□□□□□ -0.12
SNF8-203ENST00000504000 PUM1Q14671 1186 aaKnown RBP eCLIP14.29□□□□□ -0.12
SNF8-203ENST00000504000 TMC8Q8IU68 726 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 NRSN1Q8IZ57 195 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 NANOGP1Q8N7R0 232 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 PXYLP1Q8TE99 480 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 CAPSLQ8WWF8 208 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 RASSF5Q8WWW0 418 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 TP53INP1Q96A56 240 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 CIDECQ96AQ7 238 aaPredicted RBP14.29□□□□□ -0.12
SNF8-203ENST00000504000 TEFMQ96QE5 360 aaKnown RBP14.29□□□□□ -0.12
SNF8-203ENST00000504000 TAS2R16Q9NYV7 291 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 RAB23Q9ULC3 237 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 OGDHLQ9ULD0 1010 aa14.29□□□□□ -0.12
SNF8-203ENST00000504000 DENND4CQ5VZ89 1909 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 FAAHO00519 579 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 FFAR1O14842 300 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 ENTPD6O75354 484 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 PDE9AO76083 593 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 ZNF24P17028 368 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 RPS19P39019 145 aaKnown RBP14.28□□□□□ -0.12
SNF8-203ENST00000504000 NR4A2P43354 598 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 SMIM11AP58511 58 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 TAS2R50P59544 299 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 ALDH6A1Q02252 535 aaKnown RBP14.28□□□□□ -0.12
SNF8-203ENST00000504000 RUNX1T1Q06455 604 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 TMEM115Q12893 351 aaPredicted RBP14.28□□□□□ -0.12
SNF8-203ENST00000504000 CARTPTQ16568 116 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 DUSP7Q16829 419 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 BCL7AQ4VC05 210 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 TMPRSS11AQ6ZMR5 421 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 Q6ZVU0 165 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 DPPA4Q7L190 304 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 SETD7Q8WTS6 366 aaKnown RBP14.28□□□□□ -0.12
SNF8-203ENST00000504000 ASB15Q8WXK1 588 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 NEURL3Q96EH8 262 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 SAMD11Q96NU1 681 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 NLNQ9BYT8 704 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 TPK1Q9H3S4 243 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.28□□□□□ -0.12
SNF8-203ENST00000504000 ERVK13-1Q9NX77 482 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 DKK3Q9UBP4 350 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 ACAD8Q9UKU7 415 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 N6AMT1Q9Y5N5 214 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 PCM1Q15154 2024 aa14.28□□□□□ -0.12
SNF8-203ENST00000504000 H3BM21 787 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 IDH3BO43837 385 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 IL1AP01583 271 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 TIMP2P16035 220 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 PREPP48147 710 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 PSPHP78330 225 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 MC1RQ01726 317 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 SP3Q02447 781 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 GANABQ14697 944 aaKnown RBP14.27□□□□□ -0.12
SNF8-203ENST00000504000 MFSD4BQ5TF39 518 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 SAXO2Q658L1 398 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 NXPE4Q6UWF7 544 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 CD300LDQ6UXZ3 194 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 ZNF517Q6ZMY9 492 aaPredicted RBP14.27□□□□□ -0.12
SNF8-203ENST00000504000 NRARPQ7Z6K4 114 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 RAB43Q86YS6 212 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 LRRC56Q8IYG6 542 aaPredicted RBP14.27□□□□□ -0.12
SNF8-203ENST00000504000 CLDN22Q8N7P3 220 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 OR9Q1Q8NGQ5 310 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 LRIG1Q96JA1 1093 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 ZNF558Q96NG5 402 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms