RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 EIF2B3Q9NR50 452 aaKnown RBP14.56□□□□□ -0.08
PDLIM7-210ENST00000503827 MRPS33Q9Y291 106 aaKnown RBP14.56□□□□□ -0.08
PDLIM7-210ENST00000503827 MED16Q9Y2X0 877 aa14.56□□□□□ -0.08
PDLIM7-210ENST00000503827 MBD3L4A6NDZ8 208 aaPredicted RBP14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 MBD3L5A6NJ08 208 aaPredicted RBP14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 AKR1B15C9JRZ8 316 aaPredicted RBP14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 TGFBR3LH3BV60 316 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 LIASO43766 372 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 NRDCO43847 1150 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 ZNF354AO60765 605 aaPredicted RBP14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 IL18BPO95998 194 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 C8GP07360 202 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 HIST1H2AGP0C0S8 130 aaPredicted RBP14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 PAMP19021 973 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 HIST1H2ADP20671 130 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 RPL22P35268 128 aaKnown RBP14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 RNF4P78317 190 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 CCZ1BP86790 482 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 CCZ1P86791 482 aaPredicted RBP14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 CSHL1Q14406 222 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 LRRC8EQ6NSJ5 796 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 NEPROQ6NW34 567 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 RASGEF1CQ8N431 466 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 GPATCH11Q8N954 259 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 CCDC89Q8N998 374 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 CD200R1Q8TD46 325 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 FAR2Q96K12 515 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 HIST1H2AHQ96KK5 128 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 HIST1H2AJQ99878 128 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 H2AFJQ9BTM1 129 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 RBM24Q9BX46 236 aaKnown RBP14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 KLHL31Q9H511 634 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 SYBUQ9NX95 663 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 NDRG3Q9UGV2 375 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 ADAMTS6Q9UKP5 1117 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 AMFRQ9UKV5 643 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 SOX13Q9UN79 622 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 CLDN16Q9Y5I7 305 aa14.55□□□□□ -0.08
PDLIM7-210ENST00000503827 ERN1O75460 977 aaKnown RBP14.54□□□□□ -0.08
PDLIM7-210ENST00000503827 BTN3A2P78410 334 aa14.54□□□□□ -0.08
PDLIM7-210ENST00000503827 CRYZQ08257 329 aaKnown RBP14.54□□□□□ -0.08
PDLIM7-210ENST00000503827 DUSP8Q13202 625 aa14.54□□□□□ -0.08
PDLIM7-210ENST00000503827 CTBP1Q13363 440 aa14.54□□□□□ -0.08
PDLIM7-210ENST00000503827 ACKR1Q16570 336 aa14.54□□□□□ -0.08
PDLIM7-210ENST00000503827 TOR1AIP1Q5JTV8 583 aa14.54□□□□□ -0.08
PDLIM7-210ENST00000503827 ZNF549Q6P9A3 640 aa14.54□□□□□ -0.08
PDLIM7-210ENST00000503827 ZNF595Q8IYB9 648 aa14.54□□□□□ -0.08
PDLIM7-210ENST00000503827 OR14A16Q8NHC5 309 aa14.54□□□□□ -0.08
PDLIM7-210ENST00000503827 PYCR2Q96C36 320 aa14.54□□□□□ -0.08
PDLIM7-210ENST00000503827 JSRP1Q96MG2 331 aaPredicted RBP14.54□□□□□ -0.08
PDLIM7-210ENST00000503827 TRIB1Q96RU8 372 aa14.54□□□□□ -0.08
PDLIM7-210ENST00000503827 TIMP4Q99727 224 aa14.54□□□□□ -0.08
PDLIM7-210ENST00000503827 WDR83Q9BRX9 315 aaKnown RBP14.54□□□□□ -0.08
PDLIM7-210ENST00000503827 NPLQ9BXD5 320 aaPredicted RBP14.54□□□□□ -0.08
PDLIM7-210ENST00000503827 FRMD8P1Q9BZ68 369 aaPredicted RBP14.54□□□□□ -0.08
PDLIM7-210ENST00000503827 OR8D2Q9GZM6 311 aa14.54□□□□□ -0.08
PDLIM7-210ENST00000503827 SPNS1Q9H2V7 528 aa14.54□□□□□ -0.08
PDLIM7-210ENST00000503827 HEATR5AQ86XA9 2040 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 SYCE3A1L190 88 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 MBD3L3A6NE82 208 aaPredicted RBP14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 CD8B2A6NJW9 211 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 C4orf51C9J302 202 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 SERPINA6P08185 405 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 TNNI3P19429 210 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 SAT1P21673 171 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 CYLC1P35663 651 aaPredicted RBP14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 CPA2P48052 419 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 HNRNPFP52597 415 aaKnown RBP14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 RAB38P57729 211 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 BASP1P80723 227 aaKnown RBP14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 SP140Q13342 867 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 RUNX2Q13950 521 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 MPEG1Q2M385 716 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 PRAMEF20Q5VT98 475 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 DUPD1Q68J44 220 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 ZNF470Q6ECI4 717 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 PEX26Q7Z412 305 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 CLNKQ7Z7G1 428 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 CCDC170Q8IYT3 715 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 ZNF321PQ8N8H1 164 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 ANKRD53Q8N9V6 530 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 TMEM52Q8NDY8 209 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 MBD3L2Q8NHZ7 208 aaPredicted RBP14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 PAQR8Q8TEZ7 354 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 PTPMT1Q8WUK0 201 aaPredicted RBP14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 OR4K3Q96R72 315 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 TSGA10Q9BZW7 698 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 PRDM14Q9GZV8 571 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 UBTD1Q9HAC8 227 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 FBXO6Q9NRD1 293 aaPredicted RBP14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 GALNT8Q9NY28 637 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 CAMK2AQ9UQM7 478 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 COMMD10Q9Y6G5 202 aa14.53□□□□□ -0.08
PDLIM7-210ENST00000503827 PABPN1LA6NDY0 278 aaKnown RBP14.52□□□□□ -0.09
PDLIM7-210ENST00000503827 LRRC3CA6NJW4 275 aa14.52□□□□□ -0.09
PDLIM7-210ENST00000503827 MIF4GDA9UHW6 222 aaKnown RBP14.52□□□□□ -0.09
PDLIM7-210ENST00000503827 ZSCAN5DPP0CG00 497 aa14.52□□□□□ -0.09
PDLIM7-210ENST00000503827 TMIGD3P0DMS9 266 aaPredicted RBP14.52□□□□□ -0.09
PDLIM7-210ENST00000503827 GDF1P27539 372 aa14.52□□□□□ -0.09
PDLIM7-210ENST00000503827 RGS4P49798 205 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms