RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 CHTF18Q8WVB6 975 aa10.08□□□□□ -0.8
UBE2D3-212ENST00000502563 RNF31Q96EP0 1072 aa10.08□□□□□ -0.8
UBE2D3-212ENST00000502563 WDR77Q9BQA1 342 aaPredicted RBP10.08□□□□□ -0.8
UBE2D3-212ENST00000502563 ARHGAP9Q9BRR9 750 aa10.08□□□□□ -0.8
UBE2D3-212ENST00000502563 PELOQ9BRX2 385 aaKnown RBP10.08□□□□□ -0.8
UBE2D3-212ENST00000502563 YIPF2Q9BWQ6 316 aa10.08□□□□□ -0.8
UBE2D3-212ENST00000502563 LHPPQ9H008 270 aa10.08□□□□□ -0.8
UBE2D3-212ENST00000502563 C12orf65Q9H3J6 166 aaKnown RBP10.08□□□□□ -0.8
UBE2D3-212ENST00000502563 MMP25Q9NPA2 562 aa10.08□□□□□ -0.8
UBE2D3-212ENST00000502563 WDR70Q9NW82 654 aa10.08□□□□□ -0.8
UBE2D3-212ENST00000502563 MCM8Q9UJA3 840 aa10.08□□□□□ -0.8
UBE2D3-212ENST00000502563 FBXL4Q9UKA2 621 aa10.08□□□□□ -0.8
UBE2D3-212ENST00000502563 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.08□□□□□ -0.8
UBE2D3-212ENST00000502563 ASB4Q9Y574 426 aa10.08□□□□□ -0.8
UBE2D3-212ENST00000502563 ZFYVE26Q68DK2 2539 aa10.08□□□□□ -0.8
UBE2D3-212ENST00000502563 COL6A6A6NMZ7 2263 aa10.08□□□□□ -0.8
UBE2D3-212ENST00000502563 SCN3AQ9NY46 2000 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 IGSF10Q6WRI0 2623 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 BSNQ9UPA5 3926 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 C2orf72A6NCS6 295 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 ARGFXA6NJG6 315 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 FFAR3O14843 346 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 AZIN1O14977 448 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 GPR42O15529 346 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 JRKO75564 520 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 CHEK2O96017 543 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 B3GALT4O96024 378 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 ALPPP05187 535 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 PCSK2P16519 638 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 TPP2P29144 1249 aaPredicted RBP10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 NEK2P51955 445 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 CHAF1BQ13112 559 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 UGT3A2Q3SY77 523 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 CPZQ66K79 652 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 H3F3CQ6NXT2 135 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 COMMD6Q7Z4G1 85 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 NUDCD3Q8IVD9 361 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 KBTBD2Q8IY47 623 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 CLYBLQ8N0X4 340 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 EXD3Q8N9H8 876 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 C9orf43Q8TAL5 461 aaPredicted RBP10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 TM9SF4Q92544 642 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 ZNF764Q96H86 408 aaPredicted RBP10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 LPAR4Q99677 370 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 MAPKAP1Q9BPZ7 522 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 TRIM55Q9BYV6 548 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 ACPTQ9BZG2 426 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 RNF32Q9H0A6 362 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 WDR41Q9HAD4 459 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 ADAP2Q9NPF8 381 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 PFDN4Q9NQP4 134 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 PRTFDC1Q9NRG1 225 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 GPR83Q9NYM4 423 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 VTI1BQ9UEU0 232 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 SLC12A4Q9UP95 1085 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 TMED5Q9Y3A6 229 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 ZNF451Q9Y4E5 1061 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 CCL27Q9Y4X3 112 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 NBEAQ8NFP9 2946 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 MED13Q9UHV7 2174 aa10.07□□□□□ -0.8
UBE2D3-212ENST00000502563 TMEM120BA0PK00 339 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 C1orf226A1L170 272 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 SAGE2PA6NJ88 616 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 HMGB1P1B2RPK0 211 aaPredicted RBP10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 SLC28A1O00337 649 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 RTCAO00442 366 aaKnown RBP10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 KLF11O14901 512 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 TMPRSS11DO60235 418 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 DNAJB6O75190 326 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 FAM58BPP0C7Q3 252 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 PRR35P0CG20 571 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 TSPAN8P19075 237 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 CPN2P22792 545 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 SOX11P35716 441 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 FOXA1P55317 472 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 HNRNPH2P55795 449 aaKnown RBP10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 MAGOHP61326 146 aaKnown RBP10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 OLR1P78380 273 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 SLAMF1Q13291 335 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 MPP2Q14168 576 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 ELAVL1Q15717 326 aaKnown RBP10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 SMU1Q2TAY7 513 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 SOWAHCQ53LP3 525 aaPredicted RBP10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 ARL13AQ5H913 290 aaPredicted RBP10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 CRB2Q5IJ48 1285 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 IRAK1BP1Q5VVH5 260 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 OR52E8Q6IFG1 317 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 CYP20A1Q6UW02 462 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 SHISA6Q6ZSJ9 500 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 TRIM42Q8IWZ5 723 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 SAMD14Q8IZD0 417 aaPredicted RBP10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 RNF175Q8N4F7 328 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 FDCSPQ8NFU4 85 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 OR8K3Q8NH51 312 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 ELP5Q8TE02 316 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 ABHD17AQ96GS6 310 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 FCRL1Q96LA6 429 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 ATP6V1G3Q96LB4 118 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 PTCHD1Q96NR3 888 aa10.06□□□□□ -0.8
UBE2D3-212ENST00000502563 LMF1Q96S06 567 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms