RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 CCT6BQ92526 530 aa17.25■□□□□ 0.35
PRKCB-209ENST00000498058 VPS39Q96JC1 886 aa17.25■□□□□ 0.35
PRKCB-209ENST00000498058 CPNE1Q99829 537 aa17.25■□□□□ 0.35
PRKCB-209ENST00000498058 RHOJQ9H4E5 214 aa17.25■□□□□ 0.35
PRKCB-209ENST00000498058 GPAMQ9HCL2 828 aa17.25■□□□□ 0.35
PRKCB-209ENST00000498058 KLF13Q9Y2Y9 288 aaPredicted RBP17.25■□□□□ 0.35
PRKCB-209ENST00000498058 CCDC168Q8NDH2 2452 aa17.24■□□□□ 0.35
PRKCB-209ENST00000498058 PRRG2O14669 202 aa17.24■□□□□ 0.35
PRKCB-209ENST00000498058 TFECO14948 347 aaPredicted RBP17.24■□□□□ 0.35
PRKCB-209ENST00000498058 H2AFYO75367 372 aaKnown RBP17.24■□□□□ 0.35
PRKCB-209ENST00000498058 EPORP19235 508 aa17.24■□□□□ 0.35
PRKCB-209ENST00000498058 TFEBP19484 476 aa17.24■□□□□ 0.35
PRKCB-209ENST00000498058 CERS1P27544 350 aa17.24■□□□□ 0.35
PRKCB-209ENST00000498058 PLA2G16P53816 162 aa17.24■□□□□ 0.35
PRKCB-209ENST00000498058 IFFO1Q0D2I5 559 aa17.24■□□□□ 0.35
PRKCB-209ENST00000498058 TERF2Q15554 542 aa17.24■□□□□ 0.35
PRKCB-209ENST00000498058 BEND6Q5SZJ8 279 aaPredicted RBP17.24■□□□□ 0.35
PRKCB-209ENST00000498058 TAOK1Q7L7X3 1001 aa17.24■□□□□ 0.35
PRKCB-209ENST00000498058 ADAMTSL2Q86TH1 951 aa17.24■□□□□ 0.35
PRKCB-209ENST00000498058 CD163Q86VB7 1156 aa17.24■□□□□ 0.35
PRKCB-209ENST00000498058 PPM1NQ8N819 430 aa17.24■□□□□ 0.35
PRKCB-209ENST00000498058 ZNF321PQ8N8H1 164 aa17.24■□□□□ 0.35
PRKCB-209ENST00000498058 ZFP62Q8NB50 900 aaPredicted RBP17.24■□□□□ 0.35
PRKCB-209ENST00000498058 POGLUT1Q8NBL1 392 aa17.24■□□□□ 0.35
PRKCB-209ENST00000498058 FAM57AQ8TBR7 257 aa17.24■□□□□ 0.35
PRKCB-209ENST00000498058 SDCCAG3Q96C92 435 aa17.24■□□□□ 0.35
PRKCB-209ENST00000498058 VMP1Q96GC9 406 aa17.24■□□□□ 0.35
PRKCB-209ENST00000498058 NPLQ9BXD5 320 aaPredicted RBP17.24■□□□□ 0.35
PRKCB-209ENST00000498058 ENKD1Q9H0I2 346 aa17.24■□□□□ 0.35
PRKCB-209ENST00000498058 NT5DC2Q9H857 520 aa17.24■□□□□ 0.35
PRKCB-209ENST00000498058 PLSCR2Q9NRY7 297 aa17.24■□□□□ 0.35
PRKCB-209ENST00000498058 KCMF1Q9P0J7 381 aa17.24■□□□□ 0.35
PRKCB-209ENST00000498058 FETUBQ9UGM5 382 aa17.24■□□□□ 0.35
PRKCB-209ENST00000498058 PPT2Q9UMR5 302 aa17.24■□□□□ 0.35
PRKCB-209ENST00000498058 A0A0G2JMM0 328 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 A0A1W2PPB8 328 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 A0A1W2PRS3 328 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 KIR3DP1A8MWS1 328 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 KLRC4-KLRK1H3BQV0 150 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 PHGDHO43175 533 aaKnown RBP17.23■□□□□ 0.35
PRKCB-209ENST00000498058 CDC40O60508 579 aaKnown RBP eCLIP17.23■□□□□ 0.35
PRKCB-209ENST00000498058 ZNF354AO60765 605 aaPredicted RBP17.23■□□□□ 0.35
PRKCB-209ENST00000498058 CLEC3AO75596 197 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 PDE9AO76083 593 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 INHBAP08476 426 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 NUDT17P0C025 328 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 H2AFXP16104 143 aaPredicted RBP17.23■□□□□ 0.35
PRKCB-209ENST00000498058 PTGS2P35354 604 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 GGT5P36269 586 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 GP5P40197 560 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 HSPA7P48741 367 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 LIM2P55344 173 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 HSD17B7P56937 341 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 SLC13A2Q13183 592 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 OR4D1Q15615 310 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 EMC4Q5J8M3 183 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 ABHD17CQ6PCB6 329 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 FRA10AC1Q70Z53 315 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 UBE3DQ7Z6J8 389 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 TMEM156Q8N614 296 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 OR2L5Q8NG80 312 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 UHMK1Q8TAS1 419 aaKnown RBP17.23■□□□□ 0.35
PRKCB-209ENST00000498058 FAR2Q96K12 515 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 DERL2Q9GZP9 239 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 POPDC3Q9HBV1 291 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 PRDM7Q9NQW5 492 aa17.23■□□□□ 0.35
PRKCB-209ENST00000498058 PHF3Q92576 2039 aaKnown RBP17.22■□□□□ 0.35
PRKCB-209ENST00000498058 B3GALT2O43825 422 aa17.22■□□□□ 0.35
PRKCB-209ENST00000498058 OR2J2O76002 312 aa17.22■□□□□ 0.35
PRKCB-209ENST00000498058 OR6B1O95007 311 aa17.22■□□□□ 0.35
PRKCB-209ENST00000498058 C1QAP02745 245 aa17.22■□□□□ 0.35
PRKCB-209ENST00000498058 TPOP07202 933 aa17.22■□□□□ 0.35
PRKCB-209ENST00000498058 CD1DP15813 335 aa17.22■□□□□ 0.35
PRKCB-209ENST00000498058 SPRP35270 261 aaPredicted RBP17.22■□□□□ 0.35
PRKCB-209ENST00000498058 MSH2P43246 934 aa17.22■□□□□ 0.35
PRKCB-209ENST00000498058 KCNC1P48547 511 aa17.22■□□□□ 0.35
PRKCB-209ENST00000498058 DOC2AQ14183 400 aa17.22■□□□□ 0.35
PRKCB-209ENST00000498058 UAP1Q16222 522 aaPredicted RBP17.22■□□□□ 0.35
PRKCB-209ENST00000498058 GRTP1Q5TC63 336 aa17.22■□□□□ 0.35
PRKCB-209ENST00000498058 LGSNQ5TDP6 509 aa17.22■□□□□ 0.35
PRKCB-209ENST00000498058 ZNF793Q6ZN11 406 aa17.22■□□□□ 0.35
PRKCB-209ENST00000498058 TTLQ8NG68 377 aa17.22■□□□□ 0.35
PRKCB-209ENST00000498058 PTPMT1Q8WUK0 201 aaPredicted RBP17.22■□□□□ 0.35
PRKCB-209ENST00000498058 F2RL3Q96RI0 385 aa17.22■□□□□ 0.35
PRKCB-209ENST00000498058 TREX2Q9BQ50 279 aaPredicted RBP17.22■□□□□ 0.35
PRKCB-209ENST00000498058 REXO4Q9GZR2 422 aaKnown RBP17.22■□□□□ 0.35
PRKCB-209ENST00000498058 DEFB127Q9H1M4 99 aa17.22■□□□□ 0.35
PRKCB-209ENST00000498058 EPB41L4BQ9H329 900 aa17.22■□□□□ 0.35
PRKCB-209ENST00000498058 ADAP2Q9NPF8 381 aa17.22■□□□□ 0.35
PRKCB-209ENST00000498058 DNAJC11Q9NVH1 559 aa17.22■□□□□ 0.35
PRKCB-209ENST00000498058 ITGB1BP2Q9UKP3 347 aa17.22■□□□□ 0.35
PRKCB-209ENST00000498058 DAPP1Q9UN19 280 aa17.22■□□□□ 0.35
PRKCB-209ENST00000498058 HIVEP1P15822 2718 aa17.22■□□□□ 0.35
PRKCB-209ENST00000498058 INTS1Q8N201 2190 aaKnown RBP17.21■□□□□ 0.35
PRKCB-209ENST00000498058 ZFAND5O76080 213 aa17.21■□□□□ 0.35
PRKCB-209ENST00000498058 SERPINB9P50453 376 aa17.21■□□□□ 0.35
PRKCB-209ENST00000498058 SSR4P51571 173 aa17.21■□□□□ 0.35
PRKCB-209ENST00000498058 CROCCP2Q86T23 111 aa17.21■□□□□ 0.35
PRKCB-209ENST00000498058 ZNF595Q8IYB9 648 aa17.21■□□□□ 0.35
PRKCB-209ENST00000498058 KRT78Q8N1N4 520 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms