RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 BAG3O95817 575 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 TRUB2O95900 331 aaKnown RBP3.47□□□□□ -1.85
TRIM4-205ENST00000496896 LDHCP07864 332 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 GSTA1P08263 222 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 CCDC172P0C7W6 258 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 GHRP10912 638 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 JAK1P23458 1154 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 HMGB2P26583 209 aaKnown RBP3.47□□□□□ -1.85
TRIM4-205ENST00000496896 MDH1P40925 334 aaKnown RBP3.47□□□□□ -1.85
TRIM4-205ENST00000496896 CSRP3P50461 194 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 PSMC6P62333 389 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 GNGT1P63211 74 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 ASIC1P78348 528 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 MS4A2Q01362 244 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 CDC37Q16543 378 aaPredicted RBP3.47□□□□□ -1.85
TRIM4-205ENST00000496896 ZNF74Q16587 644 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 PHKG1Q16816 387 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 LACTB2Q53H82 288 aaPredicted RBP3.47□□□□□ -1.85
TRIM4-205ENST00000496896 HSP90AA4PQ58FG1 418 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 SLC10A5Q5PT55 438 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 NOTUMQ6P988 496 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 MOXD1Q6UVY6 613 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 FRRS1Q6ZNA5 592 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 CCDC121Q6ZUS5 278 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 C15orf52Q6ZUT6 534 aaKnown RBP3.47□□□□□ -1.85
TRIM4-205ENST00000496896 GPRIN3Q6ZVF9 776 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 BRINP3Q76B58 766 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 ARHGAP22Q7Z5H3 698 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 HOOK3Q86VS8 718 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 ZC3H3Q8IXZ2 948 aaKnown RBP3.47□□□□□ -1.85
TRIM4-205ENST00000496896 MAML2Q8IZL2 1156 aaPredicted RBP3.47□□□□□ -1.85
TRIM4-205ENST00000496896 GBP7Q8N8V2 638 aaPredicted RBP3.47□□□□□ -1.85
TRIM4-205ENST00000496896 CCDC26Q8TAB7 109 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 PIGBQ92521 554 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 TAF4BQ92750 862 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 C4orf45Q96LM5 186 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 LPAR4Q99677 370 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 NYXQ9GZU5 481 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 RAB17Q9H0T7 212 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 VCPKMTQ9H867 229 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 PDE7BQ9NP56 450 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 SPHK2Q9NRA0 654 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 FAM114A2Q9NRY5 505 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 PRMT7Q9NVM4 692 aaPredicted RBP3.47□□□□□ -1.85
TRIM4-205ENST00000496896 LCMT1Q9UIC8 334 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 PPIEQ9UNP9 301 aaKnown RBP3.47□□□□□ -1.85
TRIM4-205ENST00000496896 ATP6V0A2Q9Y487 856 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 SLIT2O94813 1529 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 STRCP1A6NGW2 1772 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 NAV1Q8NEY1 1877 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 COL5A3P25940 1745 aaPredicted RBP3.47□□□□□ -1.85
TRIM4-205ENST00000496896 COL24A1Q17RW2 1714 aa3.47□□□□□ -1.85
TRIM4-205ENST00000496896 XIRP1Q702N8 1843 aaKnown RBP3.47□□□□□ -1.85
TRIM4-205ENST00000496896 UBE4BO95155 1302 aa3.46□□□□□ -1.85
TRIM4-205ENST00000496896 PASKQ96RG2 1323 aa3.46□□□□□ -1.85
TRIM4-205ENST00000496896 BAZ2AQ9UIF9 1905 aaKnown RBP3.46□□□□□ -1.85
TRIM4-205ENST00000496896 MACROD2A1Z1Q3 448 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 CFAP73A6NFT4 308 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 PGRMC1O00264 195 aaKnown RBP3.46□□□□□ -1.86
TRIM4-205ENST00000496896 TEX28O15482 410 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 PRKAB2O43741 272 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 PGM3O95394 542 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 C22orf31O95567 290 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 GGPS1O95749 300 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 DARSP14868 501 aaKnown RBP3.46□□□□□ -1.86
TRIM4-205ENST00000496896 EZRP15311 586 aaKnown RBP3.46□□□□□ -1.86
TRIM4-205ENST00000496896 MUTP22033 750 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 DNASE1P24855 282 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 MPZP25189 248 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 PTGER4P35408 488 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 PRKCIP41743 596 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 EPS15P42566 896 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 FNTAP49354 379 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 MNAT1P51948 309 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 HADHBP55084 474 aaKnown RBP3.46□□□□□ -1.86
TRIM4-205ENST00000496896 HNRNPKP61978 463 aaKnown RBP eCLIP3.46□□□□□ -1.86
TRIM4-205ENST00000496896 ACTN3Q08043 901 aaPredicted RBP3.46□□□□□ -1.86
TRIM4-205ENST00000496896 ITGB3BPQ13352 177 aaPredicted RBP3.46□□□□□ -1.86
TRIM4-205ENST00000496896 RIPK1Q13546 671 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 ITIH4Q14624 930 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 IL17AQ16552 155 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 PTGISQ16647 500 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 ZCWPW2Q504Y3 356 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 C12orf60Q5U649 245 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 NUP54Q7Z3B4 507 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 CCDC65Q8IXS2 484 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 MMD2Q8IY49 270 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 MYOCDQ8IZQ8 938 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 ZNF444Q8N0Y2 327 aaPredicted RBP3.46□□□□□ -1.86
TRIM4-205ENST00000496896 Q8NBF4 154 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 LRRC15Q8TF66 581 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 RAD54LQ92698 747 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 RASL10AQ92737 203 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 PTERQ96BW5 349 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 ZNF486Q96H40 463 aaPredicted RBP3.46□□□□□ -1.86
TRIM4-205ENST00000496896 CAPZA3Q96KX2 299 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 NECTIN4Q96NY8 510 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 SPAG5Q96R06 1193 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 GAL3ST4Q96RP7 486 aa3.46□□□□□ -1.86
TRIM4-205ENST00000496896 TMEM109Q9BVC6 243 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms