RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 KLF13Q9Y2Y9 288 aaPredicted RBP11.88□□□□□ -0.51
PTPRF-214ENST00000496043 UTP20O75691 2785 aaKnown RBP11.88□□□□□ -0.51
PTPRF-214ENST00000496043 DIDO1Q9BTC0 2240 aaKnown RBP11.87□□□□□ -0.51
PTPRF-214ENST00000496043 A0A096LPK6 155 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 MYOCOSA0A1B0GUC4 107 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 HMX2A2RU54 273 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 PRSS44E7EML9 344 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 RTCAO00442 366 aaKnown RBP11.87□□□□□ -0.51
PTPRF-214ENST00000496043 SH3BGRLO75368 114 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 KLHL2O95198 593 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 HIST1H1TP22492 207 aaPredicted RBP11.87□□□□□ -0.51
PTPRF-214ENST00000496043 CPN2P22792 545 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 PTX3P26022 381 aaPredicted RBP11.87□□□□□ -0.51
PTPRF-214ENST00000496043 PIK3CBP42338 1070 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 SSR4P51571 173 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 ALDH18A1P54886 795 aaKnown RBP11.87□□□□□ -0.51
PTPRF-214ENST00000496043 IRF9Q00978 393 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 SLAMF1Q13291 335 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 BIKQ13323 160 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 C3AR1Q16581 482 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 KHDRBS2Q5VWX1 349 aaKnown RBP11.87□□□□□ -0.51
PTPRF-214ENST00000496043 RPTNQ6XPR3 784 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 HSDL2Q6YN16 418 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 ZNF793Q6ZN11 406 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 Q6ZPB1 254 aaPredicted RBP11.87□□□□□ -0.51
PTPRF-214ENST00000496043 MRGPRGQ86SM5 289 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 RELL1Q8IUW5 271 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 SIAH3Q8IW03 269 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 SULF2Q8IWU5 870 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 CENPLQ8N0S6 344 aaPredicted RBP11.87□□□□□ -0.51
PTPRF-214ENST00000496043 GHDCQ8N2G8 530 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 MMGT1Q8N4V1 131 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 ZNF808Q8N4W9 903 aaPredicted RBP11.87□□□□□ -0.51
PTPRF-214ENST00000496043 PTPMT1Q8WUK0 201 aaPredicted RBP11.87□□□□□ -0.51
PTPRF-214ENST00000496043 ITLN2Q8WWU7 325 aaPredicted RBP11.87□□□□□ -0.51
PTPRF-214ENST00000496043 CCDC120Q96HB5 630 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 CSF3RQ99062 836 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 TSPAN10Q9H1Z9 355 aaPredicted RBP11.87□□□□□ -0.51
PTPRF-214ENST00000496043 OR51B5Q9H339 312 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 TIMMDC1Q9NPL8 285 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 SNX15Q9NRS6 342 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 MS4A12Q9NXJ0 267 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 NINJ2Q9NZG7 142 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 ZNF223Q9UK11 482 aaPredicted RBP11.87□□□□□ -0.51
PTPRF-214ENST00000496043 ENTPD4Q9Y227 616 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 PCDHGA11Q9Y5H2 935 aa11.87□□□□□ -0.51
PTPRF-214ENST00000496043 TNPO3Q9Y5L0 923 aaKnown RBP11.87□□□□□ -0.51
PTPRF-214ENST00000496043 MYO7BQ6PIF6 2116 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 SAP18O00422 153 aaKnown RBP11.86□□□□□ -0.51
PTPRF-214ENST00000496043 HNRNPRO43390 633 aaKnown RBP11.86□□□□□ -0.51
PTPRF-214ENST00000496043 PEX1O43933 1283 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 KLK8O60259 260 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 LDB3O75112 727 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 ZNF24P17028 368 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 TLX1P31314 330 aaPredicted RBP11.86□□□□□ -0.51
PTPRF-214ENST00000496043 SSR2P43308 183 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 MEOX1P50221 254 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 SERPINB8P50452 374 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 RAP1GDS1P52306 607 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 SMSP52788 366 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 PHEXP78562 749 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 DDX39BQ13838 428 aaKnown RBP11.86□□□□□ -0.51
PTPRF-214ENST00000496043 NAA30Q147X3 362 aaPredicted RBP11.86□□□□□ -0.51
PTPRF-214ENST00000496043 SETDB1Q15047 1291 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 PCBP2Q15366 365 aaKnown RBP eCLIP11.86□□□□□ -0.51
PTPRF-214ENST00000496043 METTL2BQ6P1Q9 378 aaKnown RBP11.86□□□□□ -0.51
PTPRF-214ENST00000496043 XKRXQ6PP77 449 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 MYLK4Q86YV6 388 aaPredicted RBP11.86□□□□□ -0.51
PTPRF-214ENST00000496043 GPALPP1Q8IXQ4 340 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 CYP4Z2PQ8N1L4 340 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 CPSF7Q8N684 471 aaKnown RBP11.86□□□□□ -0.51
PTPRF-214ENST00000496043 MNS1Q8NEH6 495 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 OR5L2Q8NGL0 311 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 OR14A16Q8NHC5 309 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 HUS1BQ8NHY5 278 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 IFT81Q8WYA0 676 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 ZNF592Q92610 1267 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 REPS1Q96D71 796 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 C16orf45Q96MC5 204 aaPredicted RBP11.86□□□□□ -0.51
PTPRF-214ENST00000496043 VPS11Q9H270 941 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 ACSS3Q9H6R3 686 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 RUBCNLQ9H714 662 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 ACTR8Q9H981 624 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 MYOTQ9UBF9 498 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 ERVK-11Q9UQG0 969 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 TSC22D4Q9Y3Q8 395 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 KLF2Q9Y5W3 355 aaPredicted RBP11.86□□□□□ -0.51
PTPRF-214ENST00000496043 IKBKGQ9Y6K9 419 aa11.86□□□□□ -0.51
PTPRF-214ENST00000496043 TMEM200CA6NKL6 621 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 A8MVJ9 347 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 C17orf105B2RV13 164 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 PRKNO60260 465 aaPredicted RBP11.85□□□□□ -0.51
PTPRF-214ENST00000496043 UGDHO60701 494 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 OR2J2O76002 312 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 SCELO95171 688 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 INHBAP08476 426 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 RBP1P09455 135 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 ABOP16442 354 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 PIK3CGP48736 1102 aa11.85□□□□□ -0.51
PTPRF-214ENST00000496043 ARFIP1P53367 373 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms