RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 SLC18A1P54219 525 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 ABCE1P61221 599 aaKnown RBP18.26■□□□□ 0.51
HDAC4-212ENST00000495497 RAPSNQ13702 412 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 PCOLCEQ15113 449 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 DCAF10Q5QP82 559 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 CCNYL2Q5T2Q4 361 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 QSOX2Q6ZRP7 698 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 MED25Q71SY5 747 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 CPEB2Q7Z5Q1 589 aaKnown RBP18.26■□□□□ 0.51
HDAC4-212ENST00000495497 GPR180Q86V85 440 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 PARP9Q8IXQ6 854 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 CLYBLQ8N0X4 340 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 GBP7Q8N8V2 638 aaPredicted RBP18.26■□□□□ 0.51
HDAC4-212ENST00000495497 EXD3Q8N9H8 876 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 TMEM102Q8N9M5 508 aaPredicted RBP18.26■□□□□ 0.51
HDAC4-212ENST00000495497 ADAMTS18Q8TE60 1221 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 FER1L6-AS2Q96M78 137 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 TUBB1Q9H4B7 451 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 ZNF160Q9HCG1 818 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 PRDM9Q9NQV7 894 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 NMRK1Q9NWW6 199 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 LYARQ9NX58 379 aaKnown RBP18.26■□□□□ 0.51
HDAC4-212ENST00000495497 DNAJC15Q9Y5T4 150 aa18.26■□□□□ 0.51
HDAC4-212ENST00000495497 NBEAQ8NFP9 2946 aa18.25■□□□□ 0.51
HDAC4-212ENST00000495497 IGHV1-45A0A0A0MS14 117 aa18.25■□□□□ 0.51
HDAC4-212ENST00000495497 WASHC1A8K0Z3 465 aa18.25■□□□□ 0.51
HDAC4-212ENST00000495497 TMEM114B3SHH9 223 aa18.25■□□□□ 0.51
HDAC4-212ENST00000495497 PROM1O43490 865 aa18.25■□□□□ 0.51
HDAC4-212ENST00000495497 FGF4P08620 206 aa18.25■□□□□ 0.51
HDAC4-212ENST00000495497 SLC1A6P48664 564 aa18.25■□□□□ 0.51
HDAC4-212ENST00000495497 RRADP55042 308 aa18.25■□□□□ 0.51
HDAC4-212ENST00000495497 RAE1P78406 368 aaKnown RBP18.25■□□□□ 0.51
HDAC4-212ENST00000495497 ZNF33BQ06732 778 aa18.25■□□□□ 0.51
HDAC4-212ENST00000495497 Q0VFX4 171 aa18.25■□□□□ 0.51
HDAC4-212ENST00000495497 LY6DQ14210 128 aa18.25■□□□□ 0.51
HDAC4-212ENST00000495497 IMPG1Q17R60 797 aa18.25■□□□□ 0.51
HDAC4-212ENST00000495497 UGT3A2Q3SY77 523 aa18.25■□□□□ 0.51
HDAC4-212ENST00000495497 SFT2D3Q587I9 215 aa18.25■□□□□ 0.51
HDAC4-212ENST00000495497 SPDYAQ5MJ70 313 aa18.25■□□□□ 0.51
HDAC4-212ENST00000495497 NDUFAF7Q7L592 441 aa18.25■□□□□ 0.51
HDAC4-212ENST00000495497 PAGE2Q7Z2X7 111 aa18.25■□□□□ 0.51
HDAC4-212ENST00000495497 APLFQ8IW19 511 aaPredicted RBP18.25■□□□□ 0.51
HDAC4-212ENST00000495497 SCUBE1Q8IWY4 988 aa18.25■□□□□ 0.51
HDAC4-212ENST00000495497 ZNF595Q8IYB9 648 aa18.25■□□□□ 0.51
HDAC4-212ENST00000495497 ZNF700Q9H0M5 742 aa18.25■□□□□ 0.51
HDAC4-212ENST00000495497 MRPS33Q9Y291 106 aaKnown RBP18.25■□□□□ 0.51
HDAC4-212ENST00000495497 CLDN16Q9Y5I7 305 aa18.25■□□□□ 0.51
HDAC4-212ENST00000495497 SPACA6W5XKT8 324 aa18.25■□□□□ 0.51
HDAC4-212ENST00000495497 IGKV3D-11A0A0A0MRZ8 115 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 NSG1A0A0A6YYJ2 146 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 A0A1W2PR48 441 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 GLOD5A6NK44 160 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 A8MUA0 341 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 LDB3O75112 727 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 SEC24DO94855 1032 aaPredicted RBP18.24■□□□□ 0.51
HDAC4-212ENST00000495497 CELA2AP08217 269 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 LINC00032P0C843 101 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 OR4D2P58180 307 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 TNFRSF17Q02223 184 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 ID2Q02363 134 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 BST1Q10588 318 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 SLC13A2Q13183 592 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 STX3Q13277 289 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 RIPOR1Q6ZS17 1223 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 TRIM46Q7Z4K8 759 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 OR4N5Q8IXE1 308 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 OR2T11Q8NH01 316 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 TWIST2Q8WVJ9 160 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 SORT1Q99523 831 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 WDR77Q9BQA1 342 aaPredicted RBP18.24■□□□□ 0.51
HDAC4-212ENST00000495497 ATP13A2Q9NQ11 1180 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 TEX10Q9NXF1 929 aaPredicted RBP18.24■□□□□ 0.51
HDAC4-212ENST00000495497 C19orf25Q9UFG5 118 aaPredicted RBP18.24■□□□□ 0.51
HDAC4-212ENST00000495497 PHF11Q9UIL8 331 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 ADAM29Q9UKF5 820 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 MMACHCQ9Y4U1 282 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 CCL27Q9Y4X3 112 aa18.24■□□□□ 0.51
HDAC4-212ENST00000495497 SCN2AQ99250 2005 aa18.23■□□□□ 0.51
HDAC4-212ENST00000495497 NUP210LQ5VU65 1888 aa18.23■□□□□ 0.51
HDAC4-212ENST00000495497 TCRBV16S1A1N1A0A5B0 115 aa18.23■□□□□ 0.51
HDAC4-212ENST00000495497 HMGB1P1B2RPK0 211 aaPredicted RBP18.23■□□□□ 0.51
HDAC4-212ENST00000495497 CLDN4O14493 209 aa18.23■□□□□ 0.51
HDAC4-212ENST00000495497 PIP5K1BO14986 540 aa18.23■□□□□ 0.51
HDAC4-212ENST00000495497 CTNSO60931 367 aa18.23■□□□□ 0.51
HDAC4-212ENST00000495497 AIFM1O95831 613 aa18.23■□□□□ 0.51
HDAC4-212ENST00000495497 HPP00738 406 aa18.23■□□□□ 0.51
HDAC4-212ENST00000495497 CYC1P08574 325 aa18.23■□□□□ 0.51
HDAC4-212ENST00000495497 PPP2R1BP30154 601 aa18.23■□□□□ 0.51
HDAC4-212ENST00000495497 HSD17B7P56937 341 aa18.23■□□□□ 0.51
HDAC4-212ENST00000495497 ACTN3Q08043 901 aaPredicted RBP18.23■□□□□ 0.51
HDAC4-212ENST00000495497 Q6ZSR9 355 aa18.23■□□□□ 0.51
HDAC4-212ENST00000495497 DDIASQ8IXT1 998 aa18.23■□□□□ 0.51
HDAC4-212ENST00000495497 GALNT16Q8N428 558 aa18.23■□□□□ 0.51
HDAC4-212ENST00000495497 ZNF781Q8N8C0 355 aa18.23■□□□□ 0.51
HDAC4-212ENST00000495497 CLEC1AQ8NC01 280 aa18.23■□□□□ 0.51
HDAC4-212ENST00000495497 ANKRD9Q96BM1 317 aaPredicted RBP18.23■□□□□ 0.51
HDAC4-212ENST00000495497 VPS50Q96JG6 964 aa18.23■□□□□ 0.51
HDAC4-212ENST00000495497 BBC3Q96PG8 261 aaPredicted RBP18.23■□□□□ 0.51
HDAC4-212ENST00000495497 UBL7Q96S82 380 aaPredicted RBP18.23■□□□□ 0.51
HDAC4-212ENST00000495497 EBPLQ9BY08 206 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms