RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 ATOH1Q92858 354 aaPredicted RBP9.7□□□□□ -0.86
LINC00488-201ENST00000494582 PANX1Q96RD7 426 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 NPAS1Q99742 590 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 ATF6BQ99941 703 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 TMEM175Q9BSA9 504 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 SARGQ9BW04 601 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 ZNF416Q9BWM5 594 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 CHST8Q9H2A9 424 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 CCSER2Q9H7U1 834 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 FOLH1BQ9HBA9 442 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 NLE1Q9NVX2 485 aaPredicted RBP9.7□□□□□ -0.86
LINC00488-201ENST00000494582 MRPL39Q9NYK5 338 aaKnown RBP9.7□□□□□ -0.86
LINC00488-201ENST00000494582 RHCGQ9UBD6 479 aa9.7□□□□□ -0.86
LINC00488-201ENST00000494582 RGS17Q9UGC6 210 aaPredicted RBP9.7□□□□□ -0.86
LINC00488-201ENST00000494582 COL4A4P53420 1690 aaPredicted RBP9.69□□□□□ -0.86
LINC00488-201ENST00000494582 C7orf66A4D0T2 115 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 SGK494L7N484 410 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 TOXO94900 526 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 APOL3O95236 402 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 ODC1P11926 461 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 PBX3P40426 434 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 ETV5P41161 510 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 RPL35P42766 123 aaKnown RBP9.69□□□□□ -0.86
LINC00488-201ENST00000494582 BDKRB1P46663 353 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 BTG1P62324 171 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 ZNF91Q05481 1191 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 ETFDHQ16134 617 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 CPSF6Q16630 551 aaKnown RBP eCLIP9.69□□□□□ -0.86
LINC00488-201ENST00000494582 SV2CQ496J9 727 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 PAN2Q504Q3 1202 aaKnown RBP9.69□□□□□ -0.86
LINC00488-201ENST00000494582 RETSATQ6NUM9 610 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 C17orf107Q6ZR85 190 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 TEX26Q8N6G2 289 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 DNAJB8Q8NHS0 232 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 APIPQ96GX9 242 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 SEC22CQ9BRL7 303 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 DOHHQ9BU89 302 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 EBPLQ9BY08 206 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 LDAHQ9H6V9 325 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 BRD7Q9NPI1 651 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 FANCFQ9NPI8 374 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 NUDT15Q9NV35 164 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 KCTD5Q9NXV2 234 aa9.69□□□□□ -0.86
LINC00488-201ENST00000494582 PPIEQ9UNP9 301 aaKnown RBP9.69□□□□□ -0.86
LINC00488-201ENST00000494582 A0A1B0GVC2 190 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 A6NIN4 97 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 GPR182O15218 404 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 HRO43593 1189 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 PCDH7O60245 1069 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 SOX14O95416 240 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 ANXA3P12429 323 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 STOMP27105 288 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 CD79BP40259 229 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 ALDH9A1P49189 494 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 POLR2GP62487 172 aaKnown RBP eCLIP9.68□□□□□ -0.86
LINC00488-201ENST00000494582 PPP3R1P63098 170 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 FABP5Q01469 135 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 HSF2Q03933 536 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 GANABQ14697 944 aaKnown RBP9.68□□□□□ -0.86
LINC00488-201ENST00000494582 DUSP6Q16828 381 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 DUOXA1Q1HG43 343 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 ATAT1Q5SQI0 421 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 OR2G6Q5TZ20 316 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 FAM92BQ6ZTR7 304 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 CIR1Q86X95 450 aaPredicted RBP9.68□□□□□ -0.86
LINC00488-201ENST00000494582 ADGRF3Q8IZF5 1079 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 TOP6BLQ8N6T0 577 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 ZFP41Q8N8Y5 198 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 AQP11Q8NBQ7 271 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 BEST4Q8NFU0 473 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 OR2T4Q8NH00 348 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 TMEM163Q8TC26 289 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 NELL1Q92832 810 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 DMRTA2Q96SC8 542 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 COPS8Q99627 209 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 MND1Q9BWT6 205 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 CLEC4MQ9H2X3 399 aaPredicted RBP9.68□□□□□ -0.86
LINC00488-201ENST00000494582 BPIFA1Q9NP55 256 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 ACER3Q9NUN7 267 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 LYARQ9NX58 379 aaKnown RBP9.68□□□□□ -0.86
LINC00488-201ENST00000494582 FKBPLQ9UIM3 349 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 PRELID3BQ9Y3B1 194 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 SF3B6Q9Y3B4 125 aaKnown RBP9.68□□□□□ -0.86
LINC00488-201ENST00000494582 SPIN1Q9Y657 262 aaPredicted RBP9.68□□□□□ -0.86
LINC00488-201ENST00000494582 COMMD10Q9Y6G5 202 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 PLXNA4Q9HCM2 1894 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 TNS1Q9HBL0 1735 aaKnown RBP9.68□□□□□ -0.86
LINC00488-201ENST00000494582 POM121CA8CG34 1229 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 MAGEB17A8MXT2 336 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 DVL2O14641 736 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 FGF1P05230 155 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 EPORP19235 508 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 CRISP1P54107 249 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 SF1Q15637 639 aaKnown RBP9.68□□□□□ -0.86
LINC00488-201ENST00000494582 MARCH8Q5T0T0 291 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 UNC5DQ6UXZ4 953 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 USP30Q70CQ3 517 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 TRIM69Q86WT6 500 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 CHST13Q8NET6 341 aa9.68□□□□□ -0.86
LINC00488-201ENST00000494582 BCL7CQ8WUZ0 217 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms