RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 KLF8O95600 359 aaPredicted RBP18.41■□□□□ 0.54
COL27A1-207ENST00000494090 OR1E2P47887 323 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 CD83Q01151 205 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 GALNT1Q10472 559 aaPredicted RBP18.41■□□□□ 0.54
COL27A1-207ENST00000494090 ST3GAL4Q11206 333 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 RPL13AP3Q6NVV1 102 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 GID4Q8IVV7 300 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 OR10T2Q8NGX3 314 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 CNIH3Q8TBE1 160 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 MAGIXQ9H6Y5 334 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 LIPT1Q9Y234 373 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 PCDHB14Q9Y5E9 798 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 E7EQ34 232 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 RPP14O95059 124 aaKnown RBP18.41■□□□□ 0.54
COL27A1-207ENST00000494090 C8orf89P0DMQ9 161 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 MAB21L1Q13394 359 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 NCEH1Q6PIU2 408 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 ASPGQ86U10 573 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 PAQR7Q86WK9 346 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 LRRC46Q96FV0 321 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 TRPV4Q9HBA0 871 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 BACE2Q9Y5Z0 518 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 KANTRA0A1W2PQU2 76 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 OR2AT4A6NND4 320 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 KHNYNO15037 678 aaKnown RBP18.41■□□□□ 0.54
COL27A1-207ENST00000494090 STATHP02808 62 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 ITGA5P08648 1049 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 PLP2Q04941 152 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 ABRAXAS2Q15018 415 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 SEC23BQ15437 767 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 UAP1L1Q3KQV9 507 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 PIGGQ5H8A4 983 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 MOCOSQ96EN8 888 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 OR51I1Q9H343 314 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 FBRSQ9HAH7 460 aa18.41■□□□□ 0.54
COL27A1-207ENST00000494090 WDR6Q9NNW5 1121 aaKnown RBP18.41■□□□□ 0.54
COL27A1-207ENST00000494090 SH3PXD2BA1X283 911 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 SYNGR4O95473 234 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 POLR2CP19387 275 aaPredicted RBP18.4■□□□□ 0.54
COL27A1-207ENST00000494090 TIA1P31483 386 aaKnown RBP eCLIP18.4■□□□□ 0.541e-6■□□□□ 8.2
COL27A1-207ENST00000494090 ZNF565Q8N9K5 539 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 SNIP1Q8TAD8 396 aaKnown RBP18.4■□□□□ 0.54
COL27A1-207ENST00000494090 MCHR1Q99705 422 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 PIP5K1AQ99755 562 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 HSD17B1P14061 328 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 JUPP14923 745 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 KDELR2P33947 212 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 HLCSP50747 726 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 ELAVL3Q14576 367 aaKnown RBP18.4■□□□□ 0.54
COL27A1-207ENST00000494090 ZNF267Q14586 743 aaPredicted RBP18.4■□□□□ 0.54
COL27A1-207ENST00000494090 SYCE2Q6PIF2 218 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 Q8N9G6 341 aaPredicted RBP18.4■□□□□ 0.54
COL27A1-207ENST00000494090 NECTIN4Q96NY8 510 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 OR8D2Q9GZM6 311 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 FAAHO00519 579 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 OXTRP30559 389 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 DNASE1L3Q13609 305 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 RAB6CQ53S08 254 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 PSAPL1Q6NUJ1 521 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 MAMDC4Q6UXC1 1216 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 RAB6CQ9H0N0 254 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 PTGDR2Q9Y5Y4 395 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 TYRP1P17643 537 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 PRKCDQ05655 676 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 RUNDC3AQ59EK9 446 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 LCN8Q6JVE9 175 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 RAB8BQ92930 207 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 C17orf62Q9BQA9 187 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 AIFM2Q9BRQ8 373 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 DNAJC15Q9Y5T4 150 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 CDH10Q9Y6N8 788 aa18.4■□□□□ 0.54
COL27A1-207ENST00000494090 FHP07954 510 aa18.39■□□□□ 0.54
COL27A1-207ENST00000494090 HCKP08631 526 aa18.39■□□□□ 0.54
COL27A1-207ENST00000494090 PER3P56645 1201 aa18.39■□□□□ 0.54
COL27A1-207ENST00000494090 ALG10Q5BKT4 473 aa18.39■□□□□ 0.54
COL27A1-207ENST00000494090 NPWQ8N729 165 aa18.39■□□□□ 0.54
COL27A1-207ENST00000494090 ZBTB8BQ8NAP8 495 aaPredicted RBP18.39■□□□□ 0.54
COL27A1-207ENST00000494090 ADAMTS18Q8TE60 1221 aa18.39■□□□□ 0.54
COL27A1-207ENST00000494090 TMEM184CQ9NVA4 438 aa18.39■□□□□ 0.54
COL27A1-207ENST00000494090 KCNJ13O60928 360 aa18.39■□□□□ 0.53
COL27A1-207ENST00000494090 DHRS4L1P0CG22 281 aa18.39■□□□□ 0.53
COL27A1-207ENST00000494090 KCNC1P48547 511 aa18.39■□□□□ 0.53
COL27A1-207ENST00000494090 WNT7BP56706 349 aa18.39■□□□□ 0.53
COL27A1-207ENST00000494090 ARPC4P59998 168 aa18.39■□□□□ 0.53
COL27A1-207ENST00000494090 HYAL2Q12891 473 aa18.39■□□□□ 0.53
COL27A1-207ENST00000494090 MRPL49Q13405 166 aaKnown RBP18.39■□□□□ 0.53
COL27A1-207ENST00000494090 OR4D1Q15615 310 aa18.39■□□□□ 0.53
COL27A1-207ENST00000494090 SLC37A3Q8NCC5 494 aa18.39■□□□□ 0.53
COL27A1-207ENST00000494090 ZNF778Q96MU6 729 aa18.39■□□□□ 0.53
COL27A1-207ENST00000494090 SLC6A15Q9H2J7 730 aa18.39■□□□□ 0.53
COL27A1-207ENST00000494090 C14orf166Q9Y224 244 aaKnown RBP18.39■□□□□ 0.53
COL27A1-207ENST00000494090 BLOC1S5-TXNDC5H3BN57 136 aa18.39■□□□□ 0.53
COL27A1-207ENST00000494090 PPM1BO75688 479 aa18.39■□□□□ 0.53
COL27A1-207ENST00000494090 AK1P00568 194 aa18.39■□□□□ 0.53
COL27A1-207ENST00000494090 LMAN2Q12907 356 aa18.39■□□□□ 0.53
COL27A1-207ENST00000494090 GINS1Q14691 196 aa18.39■□□□□ 0.53
COL27A1-207ENST00000494090 CARM1Q86X55 608 aa18.39■□□□□ 0.53
COL27A1-207ENST00000494090 ZSWIM9Q86XI8 627 aa18.39■□□□□ 0.53
COL27A1-207ENST00000494090 PMM1Q92871 262 aa18.39■□□□□ 0.53
COL27A1-207ENST00000494090 BIRC8Q96P09 236 aa18.39■□□□□ 0.53
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