RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 NME2P22392 152 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 HIST1H1TP22492 207 aaPredicted RBP7.95□□□□□ -1.14
LRCH3-219ENST00000494069 ATP5A1P25705 553 aaKnown RBP7.95□□□□□ -1.14
LRCH3-219ENST00000494069 GRNP28799 593 aaKnown RBP7.95□□□□□ -1.14
LRCH3-219ENST00000494069 EEF1DP29692 281 aaKnown RBP7.95□□□□□ -1.14
LRCH3-219ENST00000494069 ECHS1P30084 290 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 TRHRP34981 398 aaPredicted RBP7.95□□□□□ -1.14
LRCH3-219ENST00000494069 PIK3CGP48736 1102 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 CYB561P49447 251 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 HLCSP50747 726 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 CLCN2P51788 898 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 HSD17B7P56937 341 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 ALDH6A1Q02252 535 aaKnown RBP7.95□□□□□ -1.14
LRCH3-219ENST00000494069 PCDH1Q08174 1060 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 LAPTM5Q13571 262 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 DDX39BQ13838 428 aaKnown RBP7.95□□□□□ -1.14
LRCH3-219ENST00000494069 SETDB1Q15047 1291 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 HIST2H2ACQ16777 129 aaPredicted RBP7.95□□□□□ -1.14
LRCH3-219ENST00000494069 WHAMMP3Q1A5X7 153 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 PAGE2BQ5JRK9 111 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 HIST2H2AA3Q6FI13 130 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 NCCRP1Q6ZVX7 275 aaPredicted RBP7.95□□□□□ -1.14
LRCH3-219ENST00000494069 MDGA2Q7Z553 956 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 FGD2Q7Z6J4 655 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 MYLK4Q86YV6 388 aaPredicted RBP7.95□□□□□ -1.14
LRCH3-219ENST00000494069 CHERPQ8IWX8 916 aaKnown RBP7.95□□□□□ -1.14
LRCH3-219ENST00000494069 ZNF595Q8IYB9 648 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 ARMC10Q8N2F6 343 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 MMGT1Q8N4V1 131 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 TMEM178AQ8NBL3 297 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 HUS1BQ8NHY5 278 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 PTPMT1Q8WUK0 201 aaPredicted RBP7.95□□□□□ -1.14
LRCH3-219ENST00000494069 IFT81Q8WYA0 676 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 UCN3Q969E3 161 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 ANKRD9Q96BM1 317 aaPredicted RBP7.95□□□□□ -1.14
LRCH3-219ENST00000494069 SEC16BQ96JE7 1060 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 GPR137Q96N19 417 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 KCNC2Q96PR1 638 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 MTERF1Q99551 399 aaKnown RBP7.95□□□□□ -1.14
LRCH3-219ENST00000494069 ALOXE3Q9BYJ1 711 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 CDC42EP4Q9H3Q1 356 aaKnown RBP7.95□□□□□ -1.14
LRCH3-219ENST00000494069 ACSS3Q9H6R3 686 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 TRIM45Q9H8W5 580 aaPredicted RBP7.95□□□□□ -1.14
LRCH3-219ENST00000494069 COPS7BQ9H9Q2 264 aaPredicted RBP7.95□□□□□ -1.14
LRCH3-219ENST00000494069 CPSF2Q9P2I0 782 aaKnown RBP7.95□□□□□ -1.14
LRCH3-219ENST00000494069 TINAGQ9UJW2 476 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 PPIEQ9UNP9 301 aaKnown RBP7.95□□□□□ -1.14
LRCH3-219ENST00000494069 PCDHGB6Q9Y5F9 930 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 TEX15Q9BXT5 2789 aa7.95□□□□□ -1.14
LRCH3-219ENST00000494069 A0A088AWK7 358 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 PINLYPA6NC86 204 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 WWP2O00308 870 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 PLPP1O14494 284 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 FGF17O60258 216 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 KLK8O60259 260 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 SLC19A2O60779 497 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 EEDO75530 441 aaKnown RBP7.94□□□□□ -1.14
LRCH3-219ENST00000494069 ITGA10O75578 1167 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 ZFAND5O76080 213 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 ETHE1O95571 254 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 EPB42P16452 691 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 ZNF10P21506 573 aaPredicted RBP7.94□□□□□ -1.14
LRCH3-219ENST00000494069 TYK2P29597 1187 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 PTGER1P34995 402 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 CA7P43166 264 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 SERPINB8P50452 374 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 NEK2P51955 445 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 PER3P56645 1201 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 GPR85P60893 370 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 RPS13P62277 151 aaKnown RBP7.94□□□□□ -1.14
LRCH3-219ENST00000494069 STX4Q12846 297 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 SLAMF1Q13291 335 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 NAA30Q147X3 362 aaPredicted RBP7.94□□□□□ -1.14
LRCH3-219ENST00000494069 CDSNQ15517 529 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 FAM83EQ2M2I3 478 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 TMEM35AQ53FP2 167 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 TECRLQ5HYJ1 363 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 DEPDC1Q5TB30 811 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 KHDRBS2Q5VWX1 349 aaKnown RBP7.94□□□□□ -1.14
LRCH3-219ENST00000494069 C18orf63Q68DL7 685 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 OR4C11Q6IEV9 310 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 GRHL2Q6ISB3 625 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 DGAT2L6Q6ZPD8 337 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 GOLGA7Q7Z5G4 137 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 RELL1Q8IUW5 271 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 SULF2Q8IWU5 870 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 RHEBL1Q8TAI7 183 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 SLC44A1Q8WWI5 657 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 ITLN2Q8WWU7 325 aaPredicted RBP7.94□□□□□ -1.14
LRCH3-219ENST00000494069 PPWD1Q96BP3 646 aaKnown RBP7.94□□□□□ -1.14
LRCH3-219ENST00000494069 PHF21BQ96EK2 531 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 VMP1Q96GC9 406 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 CCDC120Q96HB5 630 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 NSUN5Q96P11 429 aaKnown RBP7.94□□□□□ -1.14
LRCH3-219ENST00000494069 CDK15Q96Q40 435 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 TBCDQ9BTW9 1192 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 FUT8Q9BYC5 575 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 OR8D2Q9GZM6 311 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 LYRM4Q9HD34 91 aa7.94□□□□□ -1.14
LRCH3-219ENST00000494069 ADAP2Q9NPF8 381 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms