RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 NUDT15Q9NV35 164 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 GIMAP2Q9UG22 337 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 OR10H1Q9Y4A9 318 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 NINQ8N4C6 2090 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 GON4LQ3T8J9 2241 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 A0A087X0M5 115 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 A0A1B0GX30 115 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 ZBTB42B2RXF5 422 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 M0R082 166 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 ANKRD28O15084 1053 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 RP2O75695 350 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 KRT33AO76009 404 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 KLHL18O94889 574 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 PIGRP01833 764 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 FGF4P08620 206 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 NMBP08949 121 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 HIST1H2AGP0C0S8 130 aaPredicted RBP6.59□□□□□ -1.36
VPS13B-205ENST00000493587 ITGAMP11215 1152 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 NQO2P16083 231 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 ZNF25P17030 456 aaPredicted RBP6.59□□□□□ -1.36
VPS13B-205ENST00000493587 HIST1H2ADP20671 130 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 CRATP43155 626 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 AKR1C2P52895 323 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 CTSCP53634 463 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 AKR1C1Q04828 323 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 CRTC2Q53ET0 693 aaPredicted RBP6.59□□□□□ -1.36
VPS13B-205ENST00000493587 KANK2Q63ZY3 851 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 HIST2H2AA3Q6FI13 130 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 RGS7BPQ6MZT1 257 aaPredicted RBP6.59□□□□□ -1.36
VPS13B-205ENST00000493587 HACD2Q6Y1H2 254 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 DET1Q7L5Y6 550 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 LIMS2Q7Z4I7 341 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 ASPGQ86U10 573 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 RNF130Q86XS8 419 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 CEP97Q8IW35 865 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 ZNF561Q8N587 486 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 SETD7Q8WTS6 366 aaKnown RBP6.59□□□□□ -1.36
VPS13B-205ENST00000493587 MAFIPQ8WZ33 124 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 KCNJ9Q92806 393 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 ATG4CQ96DT6 458 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 PHF21BQ96EK2 531 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 HIST1H2AHQ96KK5 128 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 HIST1H2AJQ99878 128 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 OR51J1Q9H342 316 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 OPA3Q9H6K4 179 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 ANKRA2Q9H9E1 313 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 MAGEL2Q9UJ55 1249 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 IKZF3Q9UKT9 509 aa6.59□□□□□ -1.36
VPS13B-205ENST00000493587 ZNF490Q9ULM2 529 aaPredicted RBP6.59□□□□□ -1.36
VPS13B-205ENST00000493587 MYO18AQ92614 2054 aaKnown RBP6.58□□□□□ -1.36
VPS13B-205ENST00000493587 COL4A6Q14031 1691 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 A0A075B6Q4 140 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 TCRBV5S1A1TA0A578 114 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 H0YCG3 227 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 SOX15O60248 233 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 VPS4BO75351 444 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 SLC22A3O75751 556 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 UBXN7O94888 489 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 HCKP08631 526 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 CBSLP0DN79 551 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 HOXD8P13378 290 aaPredicted RBP6.58□□□□□ -1.36
VPS13B-205ENST00000493587 ZNF35P13682 527 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 ANXA8P13928 327 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 KDELR1P24390 212 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 HOXA6P31267 233 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 CBSP35520 551 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 RPS19P39019 145 aaKnown RBP6.58□□□□□ -1.36
VPS13B-205ENST00000493587 HUNKP57058 714 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 TMEM31Q5JXX7 168 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 ANXA8L1Q5VT79 327 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 MON1BQ7L1V2 547 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 CYP4Z1Q86W10 505 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 APOBEC3FQ8IUX4 373 aaKnown RBP6.58□□□□□ -1.36
VPS13B-205ENST00000493587 CDKL3Q8IVW4 592 aaPredicted RBP6.58□□□□□ -1.36
VPS13B-205ENST00000493587 SERPINA12Q8IW75 414 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 CMIPQ8IY22 773 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 CFAP206Q8IYR0 622 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 TMIEQ8NEW7 156 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 OR5K1Q8NHB7 308 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 ZNF606Q8WXB4 792 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 TCEAL4Q96EI5 215 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 FAM84AQ96KN4 292 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 PPM1MQ96MI6 270 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 GPR78Q96P69 363 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 TAAR1Q96RJ0 339 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 H2AFJQ9BTM1 129 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 ARL6Q9H0F7 186 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 SEC14L3Q9UDX4 400 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 NEMP2A6NFY4 417 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 POLBP06746 335 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 SBK2P0C263 348 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 MLNP12872 115 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 GNSP15586 552 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 ENGP17813 658 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 HNF1AP20823 631 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 AKAP5P24588 427 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 MPIP34949 423 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 VGLL4Q14135 290 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 TKFCQ3LXA3 575 aa6.58□□□□□ -1.36
VPS13B-205ENST00000493587 FSTL4Q6MZW2 842 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms