RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 ZFR2Q9UPR6 939 aaKnown RBP13.1□□□□□ -0.31
TRIM11-204ENST00000493030 OR6C70A6NIJ9 312 aa13.1□□□□□ -0.31
TRIM11-204ENST00000493030 RFPL1O75677 317 aa13.1□□□□□ -0.31
TRIM11-204ENST00000493030 VNN2O95498 520 aa13.1□□□□□ -0.31
TRIM11-204ENST00000493030 VIPR2P41587 438 aa13.1□□□□□ -0.31
TRIM11-204ENST00000493030 KCNC4Q03721 635 aa13.1□□□□□ -0.31
TRIM11-204ENST00000493030 GRB7Q14451 532 aa13.1□□□□□ -0.31
TRIM11-204ENST00000493030 DHCR24Q15392 516 aa13.1□□□□□ -0.31
TRIM11-204ENST00000493030 FAM189A2Q15884 450 aa13.1□□□□□ -0.31
TRIM11-204ENST00000493030 SMARCD2Q92925 531 aa13.1□□□□□ -0.31
TRIM11-204ENST00000493030 LRIG1Q96JA1 1093 aa13.1□□□□□ -0.31
TRIM11-204ENST00000493030 F2RL3Q96RI0 385 aa13.1□□□□□ -0.31
TRIM11-204ENST00000493030 ASB6Q9NWX5 421 aa13.1□□□□□ -0.31
TRIM11-204ENST00000493030 C14orf166Q9Y224 244 aaKnown RBP13.1□□□□□ -0.31
TRIM11-204ENST00000493030 RNF6Q9Y252 685 aa13.1□□□□□ -0.31
TRIM11-204ENST00000493030 NOP16Q9Y3C1 178 aaKnown RBP13.1□□□□□ -0.31
TRIM11-204ENST00000493030 SLC33A1O00400 549 aaPredicted RBP13.09□□□□□ -0.31
TRIM11-204ENST00000493030 TP53I11O14683 189 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 NUAK1O60285 661 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 HNRNPA1P09651 372 aaKnown RBP eCLIP13.09□□□□□ -0.31
TRIM11-204ENST00000493030 SRCP12931 536 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 FBLP22087 321 aaKnown RBP13.09□□□□□ -0.31
TRIM11-204ENST00000493030 PLP2Q04941 152 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 CARD17Q5XLA6 110 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 ERI1Q8IV48 349 aaKnown RBP13.09□□□□□ -0.31
TRIM11-204ENST00000493030 OR51A7Q8NH64 312 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 BBS10Q8TAM1 723 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 C15orf40Q8WUR7 153 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 OR5P2Q8WZ92 322 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 NR4A3Q92570 626 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 G6PC3Q9BUM1 346 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 APOBEC3BQ9UH17 382 aaKnown RBP13.09□□□□□ -0.31
TRIM11-204ENST00000493030 IFT52Q9Y366 437 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 PTGDR2Q9Y5Y4 395 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 RGPD8O14715 1765 aaPredicted RBP13.09□□□□□ -0.31
TRIM11-204ENST00000493030 NPIPA2E9PIF3 369 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 NPIPA3F8WFD2 350 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 MAFKO60675 156 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 APOL3O95236 402 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 FARS2O95363 451 aaKnown RBP13.09□□□□□ -0.31
TRIM11-204ENST00000493030 MAPK3P27361 379 aaPredicted RBP13.09□□□□□ -0.31
TRIM11-204ENST00000493030 GLP1RP43220 463 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 SLC15A1P46059 708 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 DUSP3P51452 185 aaPredicted RBP13.09□□□□□ -0.31
TRIM11-204ENST00000493030 PLCXD2Q0VAA5 305 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 SGCAQ16586 387 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 CATSPEREQ5SY80 951 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 TMEM107Q6UX40 140 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 TMEM234Q8WY98 164 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 S100A16Q96FQ6 103 aaKnown RBP13.09□□□□□ -0.31
TRIM11-204ENST00000493030 COL1A1P02452 1464 aaPredicted RBP13.09□□□□□ -0.31
TRIM11-204ENST00000493030 MYADML2A6NDP7 307 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 PEPDP12955 493 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 GRIA2P42262 883 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 OR8S1Q8NH09 359 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 LRRC15Q8TF66 581 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 HSPA12BQ96MM6 686 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 SAMD11Q96NU1 681 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 ZNF700Q9H0M5 742 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 HPF1Q9NWY4 346 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 LRRC42Q9Y546 428 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 LTBP3Q9NS15 1303 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 VEGFDO43915 354 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 F8A1P23610 371 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 TIA1P31483 386 aaKnown RBP eCLIP13.09□□□□□ -0.315e-6■■■■□ 20.5
TRIM11-204ENST00000493030 NR0B1P51843 470 aaKnown RBP13.09□□□□□ -0.31
TRIM11-204ENST00000493030 SLC10A2Q12908 348 aaPredicted RBP13.09□□□□□ -0.31
TRIM11-204ENST00000493030 SEC23BQ15437 767 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 NIPAL1Q6NVV3 410 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 BEND4Q6ZU67 534 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 KCTD9Q7L273 389 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 APCDD1Q8J025 514 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 OR1F2PQ96R84 312 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 MLXQ9UH92 298 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 ZNF487B1APH4 448 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 DUX1O43812 170 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 DFNA5O60443 496 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 PVALBP20472 110 aaPredicted RBP13.09□□□□□ -0.31
TRIM11-204ENST00000493030 CD72P21854 359 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 MAGEA12P43365 314 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 MECP2P51608 486 aaKnown RBP13.09□□□□□ -0.31
TRIM11-204ENST00000493030 TECRLQ5HYJ1 363 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 NCEH1Q6PIU2 408 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 WDTC1Q8N5D0 677 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 MARCH4Q9P2E8 410 aaPredicted RBP13.09□□□□□ -0.31
TRIM11-204ENST00000493030 CARD8Q9Y2G2 431 aa13.09□□□□□ -0.31
TRIM11-204ENST00000493030 TOPAZ1Q8N9V7 1692 aa13.08□□□□□ -0.31
TRIM11-204ENST00000493030 J3QRK9 145 aa13.08□□□□□ -0.32
TRIM11-204ENST00000493030 MPC1LP0DKB6 136 aa13.08□□□□□ -0.32
TRIM11-204ENST00000493030 SHQ1Q6PI26 577 aaKnown RBP13.08□□□□□ -0.32
TRIM11-204ENST00000493030 CSNK1A1LQ8N752 337 aa13.08□□□□□ -0.32
TRIM11-204ENST00000493030 THAP6Q8TBB0 222 aa13.08□□□□□ -0.32
TRIM11-204ENST00000493030 TRIM43Q96BQ3 446 aaPredicted RBP13.08□□□□□ -0.32
TRIM11-204ENST00000493030 FBXL8Q96CD0 374 aa13.08□□□□□ -0.32
TRIM11-204ENST00000493030 BEX2Q9BXY8 128 aa13.08□□□□□ -0.32
TRIM11-204ENST00000493030 VRTNQ9H8Y1 702 aa13.08□□□□□ -0.32
TRIM11-204ENST00000493030 BEX1Q9HBH7 125 aa13.08□□□□□ -0.32
TRIM11-204ENST00000493030 IL23AQ9NPF7 189 aa13.08□□□□□ -0.32
TRIM11-204ENST00000493030 FTSJ1Q9UET6 329 aa13.08□□□□□ -0.32
TRIM11-204ENST00000493030 OR2B3O76000 313 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms