RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 TMEM178AQ8NBL3 297 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 OR5M9Q8NGP3 310 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 GABPB2Q8TAK5 448 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-211ENST00000491581 UHMK1Q8TAS1 419 aaKnown RBP8.27□□□□□ -1.09
HDAC3-211ENST00000491581 ZNF473Q8WTR7 871 aaKnown RBP8.27□□□□□ -1.09
HDAC3-211ENST00000491581 KIAA1191Q96A73 305 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 MTFMTQ96DP5 389 aaKnown RBP8.27□□□□□ -1.09
HDAC3-211ENST00000491581 SCYL1Q96KG9 808 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 RASL10BQ96S79 203 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 DMRTA2Q96SC8 542 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 MTERF1Q99551 399 aaKnown RBP8.27□□□□□ -1.09
HDAC3-211ENST00000491581 CPNE1Q99829 537 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 LRRC1Q9BTT6 524 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 ALOXE3Q9BYJ1 711 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 CD244Q9BZW8 370 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 PRM3Q9NNZ6 103 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 WHRNQ9P202 907 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 ITGB1BP2Q9UKP3 347 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 LRBAP50851 2863 aa8.27□□□□□ -1.09
HDAC3-211ENST00000491581 EXPH5Q8NEV8 1989 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 FAM90A27PA6NNH2 459 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 C17orf105B2RV13 164 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 PPP6CO00743 305 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 PLPP1O14494 284 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 TFECO14948 347 aaPredicted RBP8.26□□□□□ -1.09
HDAC3-211ENST00000491581 NME6O75414 186 aaPredicted RBP8.26□□□□□ -1.09
HDAC3-211ENST00000491581 CYC1P08574 325 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 CCL3P10147 92 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 TSPAN8P19075 237 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 IL10P22301 178 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 TRHRP34981 398 aaPredicted RBP8.26□□□□□ -1.09
HDAC3-211ENST00000491581 PIGAP37287 484 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 CLCN2P51788 898 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 MTTPP55157 894 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 RPS13P62277 151 aaKnown RBP8.26□□□□□ -1.09
HDAC3-211ENST00000491581 GUCY2DQ02846 1103 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 CALCOCO2Q13137 446 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 ART3Q13508 389 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 DESI1Q6ICB0 168 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 SULT1C3Q6IMI6 304 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 FAM180BQ6P0A1 224 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 TRIM40Q6P9F5 258 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 ADGRD1Q6QNK2 874 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 MYLK4Q86YV6 388 aaPredicted RBP8.26□□□□□ -1.09
HDAC3-211ENST00000491581 C9orf40Q8IXQ3 194 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 MMP21Q8N119 569 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 ZNF808Q8N4W9 903 aaPredicted RBP8.26□□□□□ -1.09
HDAC3-211ENST00000491581 TEX9Q8N6V9 391 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 SIMC1Q8NDZ2 872 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 OR2M7Q8NG81 312 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 OR7G3Q8NG95 312 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 SLC2A12Q8TD20 617 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 ZNF721Q8TF20 911 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 ANKRD7Q92527 254 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 NRGNQ92686 78 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 SDCCAG3Q96C92 435 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 WDR34Q96EX3 536 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 PTCD3Q96EY7 689 aaKnown RBP8.26□□□□□ -1.09
HDAC3-211ENST00000491581 VMP1Q96GC9 406 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 NSUN5Q96P11 429 aaKnown RBP8.26□□□□□ -1.09
HDAC3-211ENST00000491581 SERINC2Q96SA4 455 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 CNPPD1Q9BV87 410 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 ZNF717Q9BY31 904 aaPredicted RBP8.26□□□□□ -1.09
HDAC3-211ENST00000491581 FAM129AQ9BZQ8 928 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 TRIM45Q9H8W5 580 aaPredicted RBP8.26□□□□□ -1.09
HDAC3-211ENST00000491581 COPS7BQ9H9Q2 264 aaPredicted RBP8.26□□□□□ -1.09
HDAC3-211ENST00000491581 POPDC3Q9HBV1 291 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 PNPLA3Q9NST1 481 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 SUCOQ9UBS9 1254 aaKnown RBP8.26□□□□□ -1.09
HDAC3-211ENST00000491581 PPT2Q9UMR5 302 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 ERVK-11Q9UQG0 969 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 RNF11Q9Y3C5 154 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 ATG4BQ9Y4P1 393 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 CACNA1CQ13936 2221 aa8.26□□□□□ -1.09
HDAC3-211ENST00000491581 FAM187AA6NFU0 413 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 URADA6NGE7 173 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 NPIPA2E9PIF3 369 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 NPIPA3F8WFD2 350 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 TMPRSS11DO60235 418 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 CTNSO60931 367 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 NADKO95544 446 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-211ENST00000491581 CLPSP04118 112 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 C2P06681 752 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 FREM3P0C091 2139 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 RFPL3SP0C7P2 107 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 TNNI3P19429 210 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 CASQ1P31415 396 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 SSR2P43308 183 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 MAGEA5P43359 124 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 SSR4P51571 173 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 HSD17B7P56937 341 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 AP2B1P63010 937 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 RNF4P78317 190 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 RBPJQ06330 500 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 ASPHQ12797 758 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 CBLBQ13191 982 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 SLAMF1Q13291 335 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 PFKFB4Q16877 469 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 GRTP1Q5TC63 336 aa8.25□□□□□ -1.09
HDAC3-211ENST00000491581 PRAMEF20Q5VT98 475 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms