RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 NR5A2O00482 541 aa20.53■□□□□ 0.88
VCPKMT-204ENST00000491402 CHST10O43529 356 aa20.53■□□□□ 0.88
VCPKMT-204ENST00000491402 CPNE3O75131 537 aaKnown RBP20.53■□□□□ 0.88
VCPKMT-204ENST00000491402 PRKRAO75569 313 aaKnown RBP20.53■□□□□ 0.88
VCPKMT-204ENST00000491402 COX7A2P14406 83 aa20.53■□□□□ 0.88
VCPKMT-204ENST00000491402 ITGAXP20702 1163 aa20.53■□□□□ 0.88
VCPKMT-204ENST00000491402 BUD31P41223 144 aaPredicted RBP20.53■□□□□ 0.88
VCPKMT-204ENST00000491402 SHC2P98077 582 aa20.53■□□□□ 0.88
VCPKMT-204ENST00000491402 MAT1AQ00266 395 aaKnown RBP20.53■□□□□ 0.88
VCPKMT-204ENST00000491402 TNFRSF17Q02223 184 aa20.53■□□□□ 0.88
VCPKMT-204ENST00000491402 CAMK2BQ13554 666 aa20.53■□□□□ 0.88
VCPKMT-204ENST00000491402 PDE7AQ13946 482 aa20.53■□□□□ 0.88
VCPKMT-204ENST00000491402 FAM174BQ3ZCQ3 159 aa20.53■□□□□ 0.88
VCPKMT-204ENST00000491402 DCAF12Q5T6F0 453 aa20.53■□□□□ 0.88
VCPKMT-204ENST00000491402 C18orf63Q68DL7 685 aa20.53■□□□□ 0.88
VCPKMT-204ENST00000491402 OR7A2PQ8NGA2 310 aa20.53■□□□□ 0.88
VCPKMT-204ENST00000491402 GBP5Q96PP8 586 aa20.53■□□□□ 0.88
VCPKMT-204ENST00000491402 CLK4Q9HAZ1 481 aaKnown RBP20.53■□□□□ 0.88
VCPKMT-204ENST00000491402 SPACA6W5XKT8 324 aa20.53■□□□□ 0.88
VCPKMT-204ENST00000491402 LOC100653049A0A140TA62 436 aa20.52■□□□□ 0.88
VCPKMT-204ENST00000491402 GABRR3A8MPY1 467 aa20.52■□□□□ 0.88
VCPKMT-204ENST00000491402 KRT34O76011 436 aa20.52■□□□□ 0.88
VCPKMT-204ENST00000491402 NR2F6P10588 404 aa20.52■□□□□ 0.88
VCPKMT-204ENST00000491402 DRD2P14416 443 aa20.52■□□□□ 0.88
VCPKMT-204ENST00000491402 CPN2P22792 545 aa20.52■□□□□ 0.88
VCPKMT-204ENST00000491402 ALDH9A1P49189 494 aa20.52■□□□□ 0.88
VCPKMT-204ENST00000491402 KCNK10P57789 538 aa20.52■□□□□ 0.88
VCPKMT-204ENST00000491402 KRT72Q14CN4 511 aa20.52■□□□□ 0.88
VCPKMT-204ENST00000491402 SYT16Q17RD7 645 aa20.52■□□□□ 0.88
VCPKMT-204ENST00000491402 DPY19L1Q2PZI1 675 aa20.52■□□□□ 0.88
VCPKMT-204ENST00000491402 SPANXN4Q5MJ08 99 aa20.52■□□□□ 0.88
VCPKMT-204ENST00000491402 ANKRD26P1Q6NSI1 321 aa20.52■□□□□ 0.88
VCPKMT-204ENST00000491402 R3HCC1LQ7Z5L2 792 aaKnown RBP20.52■□□□□ 0.88
VCPKMT-204ENST00000491402 POU5F2Q8N7G0 328 aa20.52■□□□□ 0.88
VCPKMT-204ENST00000491402 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.52■□□□□ 0.88
VCPKMT-204ENST00000491402 TAAR9Q96RI9 348 aa20.52■□□□□ 0.88
VCPKMT-204ENST00000491402 ULBP3Q9BZM4 244 aa20.52■□□□□ 0.88
VCPKMT-204ENST00000491402 ZNF304Q9HCX3 659 aa20.52■□□□□ 0.88
VCPKMT-204ENST00000491402 ARL8BQ9NVJ2 186 aa20.52■□□□□ 0.88
VCPKMT-204ENST00000491402 C1orf226A1L170 272 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 CYR61O00622 381 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 UBOX5O94941 541 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 PIM1P11309 404 aaPredicted RBP20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 ZNF28P17035 718 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 RPL3P39023 403 aaKnown RBP20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 RAB38P57729 211 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 DSG2Q14126 1118 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 MAPRE2Q15555 327 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 SNX32Q86XE0 403 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 TICAM1Q8IUC6 712 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 FAM47BQ8NA70 645 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 UCN3Q969E3 161 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 CMTM5Q96DZ9 223 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 MTERF3Q96E29 417 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 SPDL1Q96EA4 605 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 DDA1Q9BW61 102 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 C5AR2Q9P296 337 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 ATP6V1HQ9UI12 483 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 MAP4K5Q9Y4K4 846 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 PCDHA9Q9Y5H5 950 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 GLOD5A6NK44 160 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 KIAA0754O94854 1291 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 CBX6O95503 412 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 PGRP06401 933 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 SNRPB2P08579 225 aaKnown RBP20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 ATXN8OSP0DMR3 200 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 RNH1P13489 461 aaKnown RBP20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 CAPN3P20807 821 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 TLX1P31314 330 aaPredicted RBP20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 RORAP35398 523 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 DGKQP52824 942 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 ABHD18Q0P651 414 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 CYLC2Q14093 348 aaPredicted RBP20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 TIGD2Q4W5G0 525 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 CAMKMTQ7Z624 323 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 DSELQ8IZU8 1212 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 OR51Q1Q8NH59 317 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 RP9Q8TA86 221 aaKnown RBP20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 COL26A1Q96A83 441 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 VPS33AQ96AX1 596 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 PPCDCQ96CD2 204 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 PEX11GQ96HA9 241 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 PRPF18Q99633 342 aaKnown RBP20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 ZPBPQ9BS86 351 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 SLC25A23Q9BV35 468 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 ASPSCR1Q9BZE9 553 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 POLR1BQ9H9Y6 1135 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 SLC52A3Q9NQ40 469 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 EHD3Q9NZN3 535 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 SH3BP4Q9P0V3 963 aa20.51■□□□□ 0.87
VCPKMT-204ENST00000491402 IL6P05231 212 aa20.5■□□□□ 0.87
VCPKMT-204ENST00000491402 COX4I1P13073 169 aa20.5■□□□□ 0.87
VCPKMT-204ENST00000491402 FBLP22087 321 aaKnown RBP20.5■□□□□ 0.87
VCPKMT-204ENST00000491402 PRDX6P30041 224 aa20.5■□□□□ 0.87
VCPKMT-204ENST00000491402 KIR3DL1P43629 444 aa20.5■□□□□ 0.87
VCPKMT-204ENST00000491402 GABREP78334 506 aa20.5■□□□□ 0.87
VCPKMT-204ENST00000491402 SRSF11Q05519 484 aaKnown RBP20.5■□□□□ 0.87
VCPKMT-204ENST00000491402 PGS1Q32NB8 556 aa20.5■□□□□ 0.87
VCPKMT-204ENST00000491402 VPS26BQ4G0F5 336 aa20.5■□□□□ 0.87
VCPKMT-204ENST00000491402 CPTPQ5TA50 214 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms