RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 KIF2BQ8N4N8 673 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 ACOT4Q8N9L9 421 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 OR7G3Q8NG95 312 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 KCTD4Q8WVF5 259 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 ASB15Q8WXK1 588 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 SCYL1Q96KG9 808 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 GPR137Q96N19 417 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 QRFPRQ96P65 431 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 ATOH8Q96SQ7 321 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 PELOQ9BRX2 385 aaKnown RBP15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 L2HGDHQ9H9P8 463 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 RYDENQ9NUL5 291 aaKnown RBP15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 NPIPA1Q9UND3 350 aa15.47■□□□□ 0.07
PDLIM2-217ENST00000491330 SHANK1Q9Y566 2161 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 FLNCQ14315 2725 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 ASPDHA6ND91 283 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 A8MVJ9 347 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 ACOT7O00154 380 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 PRRG2O14669 202 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 NME2P1O60361 137 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 ZG16O60844 167 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 ITGA10O75578 1167 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 NME2P22392 152 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 HIST1H1TP22492 207 aaPredicted RBP15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 ATP5A1P25705 553 aaKnown RBP15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 CA7P43166 264 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 E2F2Q14209 437 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 SETDB1Q15047 1291 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 C10orf62Q5T681 223 aaPredicted RBP15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 DEPDC1Q5TB30 811 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 TTC19Q6DKK2 380 aaPredicted RBP15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 OR4C11Q6IEV9 310 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 XKRXQ6PP77 449 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 BNC2Q6ZN30 1099 aaPredicted RBP15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 CLNKQ7Z7G1 428 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 NFAM1Q8NET5 270 aaPredicted RBP15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 ZNF473Q8WTR7 871 aaKnown RBP15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 TANKQ92844 425 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 NCLNQ969V3 563 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 MTBPQ96DY7 904 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 DGAT2Q96PD7 388 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 MS4A8Q9BY19 250 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 TRIM45Q9H8W5 580 aaPredicted RBP15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 PPCSQ9HAB8 311 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 CHST11Q9NPF2 352 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 PRDM7Q9NQW5 492 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 IGSF5Q9NSI5 407 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 HPF1Q9NWY4 346 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 AHSPQ9NZD4 102 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 CPSF2Q9P2I0 782 aaKnown RBP15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 VTI1BQ9UEU0 232 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 DOCK10Q96BY6 2186 aa15.46■□□□□ 0.07
PDLIM2-217ENST00000491330 CNTRLQ7Z7A1 2325 aa15.45■□□□□ 0.06
PDLIM2-217ENST00000491330 TFECO14948 347 aaPredicted RBP15.45■□□□□ 0.06
PDLIM2-217ENST00000491330 HNRNPRO43390 633 aaKnown RBP15.45■□□□□ 0.06
PDLIM2-217ENST00000491330 ASNA1O43681 348 aa15.45■□□□□ 0.06
PDLIM2-217ENST00000491330 NEURL1O76050 574 aa15.45■□□□□ 0.06
PDLIM2-217ENST00000491330 ACSL3O95573 720 aa15.45■□□□□ 0.06
PDLIM2-217ENST00000491330 MST1P26927 711 aa15.45■□□□□ 0.06
PDLIM2-217ENST00000491330 PMP22Q01453 160 aa15.45■□□□□ 0.06
PDLIM2-217ENST00000491330 SLAMF1Q13291 335 aa15.45■□□□□ 0.06
PDLIM2-217ENST00000491330 ART3Q13508 389 aa15.45■□□□□ 0.06
PDLIM2-217ENST00000491330 PCBP2Q15366 365 aaKnown RBP eCLIP15.45■□□□□ 0.069e-7■■■■□ 24.1
PDLIM2-217ENST00000491330 CYP20A1Q6UW02 462 aa15.45■□□□□ 0.06
PDLIM2-217ENST00000491330 SPPL2CQ8IUH8 684 aa15.45■□□□□ 0.06
PDLIM2-217ENST00000491330 ARMC10Q8N2F6 343 aa15.45■□□□□ 0.06
PDLIM2-217ENST00000491330 ZNF808Q8N4W9 903 aaPredicted RBP15.45■□□□□ 0.06
PDLIM2-217ENST00000491330 OR8K3Q8NH51 312 aa15.45■□□□□ 0.06
PDLIM2-217ENST00000491330 PAFAH2Q99487 392 aa15.45■□□□□ 0.06
PDLIM2-217ENST00000491330 OR8D2Q9GZM6 311 aa15.45■□□□□ 0.06
PDLIM2-217ENST00000491330 IPPKQ9H8X2 491 aa15.45■□□□□ 0.06
PDLIM2-217ENST00000491330 LYARQ9NX58 379 aaKnown RBP15.45■□□□□ 0.06
PDLIM2-217ENST00000491330 SH3BGRL2Q9UJC5 107 aa15.45■□□□□ 0.06
PDLIM2-217ENST00000491330 PPIEQ9UNP9 301 aaKnown RBP15.45■□□□□ 0.06
PDLIM2-217ENST00000491330 TSC22D4Q9Y3Q8 395 aa15.45■□□□□ 0.06
PDLIM2-217ENST00000491330 ARHGAP10A1A4S6 786 aa15.44■□□□□ 0.06
PDLIM2-217ENST00000491330 C17orf105B2RV13 164 aa15.44■□□□□ 0.06
PDLIM2-217ENST00000491330 PRSS44E7EML9 344 aa15.44■□□□□ 0.06
PDLIM2-217ENST00000491330 CYR61O00622 381 aa15.44■□□□□ 0.06
PDLIM2-217ENST00000491330 CLDN9O95484 217 aa15.44■□□□□ 0.06
PDLIM2-217ENST00000491330 CLDN1O95832 211 aa15.44■□□□□ 0.06
PDLIM2-217ENST00000491330 MAGEA12P43365 314 aa15.44■□□□□ 0.06
PDLIM2-217ENST00000491330 PLIN5Q00G26 463 aa15.44■□□□□ 0.06
PDLIM2-217ENST00000491330 TBL3Q12788 808 aaKnown RBP15.44■□□□□ 0.06
PDLIM2-217ENST00000491330 GTF2H2Q13888 395 aa15.44■□□□□ 0.06
PDLIM2-217ENST00000491330 C6orf163Q5TEZ5 329 aa15.44■□□□□ 0.06
PDLIM2-217ENST00000491330 GTF2H2CQ6P1K8 395 aa15.44■□□□□ 0.06
PDLIM2-217ENST00000491330 OPN5Q6U736 354 aa15.44■□□□□ 0.06
PDLIM2-217ENST00000491330 MRGPRGQ86SM5 289 aa15.44■□□□□ 0.06
PDLIM2-217ENST00000491330 GPR180Q86V85 440 aa15.44■□□□□ 0.06
PDLIM2-217ENST00000491330 APCDD1LQ8NCL9 501 aa15.44■□□□□ 0.06
PDLIM2-217ENST00000491330 HUS1BQ8NHY5 278 aa15.44■□□□□ 0.06
PDLIM2-217ENST00000491330 FRMD6Q96NE9 622 aa15.44■□□□□ 0.06
PDLIM2-217ENST00000491330 RPF2Q9H7B2 306 aaKnown RBP15.44■□□□□ 0.06
PDLIM2-217ENST00000491330 NMRK1Q9NWW6 199 aa15.44■□□□□ 0.06
PDLIM2-217ENST00000491330 NFU1Q9UMS0 254 aa15.44■□□□□ 0.06
PDLIM2-217ENST00000491330 ENTPD4Q9Y227 616 aa15.44■□□□□ 0.06
PDLIM2-217ENST00000491330 KLF2Q9Y5W3 355 aaPredicted RBP15.44■□□□□ 0.06
PDLIM2-217ENST00000491330 SCN3AQ9NY46 2000 aa15.44■□□□□ 0.06
PDLIM2-217ENST00000491330 EXOC1LA0A1B0GW35 172 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms