RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 LURAP1Q96LR2 239 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 CSF3RQ99062 836 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 TBCDQ9BTW9 1192 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 OR8D2Q9GZM6 311 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 LIN28AQ9H9Z2 209 aaKnown RBP18.34■□□□□ 0.53
SREBF1-216ENST00000490796 LYRM4Q9HD34 91 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 MYOTQ9UBF9 498 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 PTBP2Q9UKA9 531 aaKnown RBP18.34■□□□□ 0.53
SREBF1-216ENST00000490796 SUPT3HB4E1H0 165 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 WWP2O00308 870 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 CYR61O00622 381 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 SUPT3HO75486 399 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 WISP3O95389 354 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-216ENST00000490796 COX7A2P14406 83 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 GPR143P51810 404 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 SLMAPQ14BN4 828 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 TBCCQ15814 346 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 CMPK2Q5EBM0 449 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 GRTP1Q5TC63 336 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 ADNP2Q6IQ32 1131 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 C16orf47Q6ZP98 133 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-216ENST00000490796 CYS1Q717R9 158 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 FGD2Q7Z6J4 655 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 TBC1D1Q86TI0 1168 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-216ENST00000490796 CCDC25Q86WR0 208 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 CHERPQ8IWX8 916 aaKnown RBP18.33■□□□□ 0.52
SREBF1-216ENST00000490796 PPM1NQ8N819 430 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 C7orf57Q8NEG2 295 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 OR5L2Q8NGL0 311 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 DMRTA2Q96SC8 542 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 CD244Q9BZW8 370 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 PHACTR1Q9C0D0 580 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 DEFB127Q9H1M4 99 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 ALG9Q9H6U8 611 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 NMRAL1Q9HBL8 299 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 NUDT4Q9NZJ9 180 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 COPS7AQ9UBW8 275 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 VTI1BQ9UEU0 232 aa18.33■□□□□ 0.52
SREBF1-216ENST00000490796 UTP11Q9Y3A2 253 aaKnown RBP18.33■□□□□ 0.52
SREBF1-216ENST00000490796 FAM159BA6NKW6 160 aa18.32■□□□□ 0.52
SREBF1-216ENST00000490796 C17orf105B2RV13 164 aa18.32■□□□□ 0.52
SREBF1-216ENST00000490796 C19orf84I3L1E1 186 aa18.32■□□□□ 0.52
SREBF1-216ENST00000490796 DYRK3O43781 588 aa18.32■□□□□ 0.52
SREBF1-216ENST00000490796 PRKNO60260 465 aaPredicted RBP18.32■□□□□ 0.52
SREBF1-216ENST00000490796 SH3BGRLO75368 114 aa18.32■□□□□ 0.52
SREBF1-216ENST00000490796 SSR2P43308 183 aa18.32■□□□□ 0.52
SREBF1-216ENST00000490796 PPIAP62937 165 aaKnown RBP18.32■□□□□ 0.52
SREBF1-216ENST00000490796 CDSNQ15517 529 aa18.32■□□□□ 0.52
SREBF1-216ENST00000490796 TMEM35AQ53FP2 167 aa18.32■□□□□ 0.52
SREBF1-216ENST00000490796 MED27Q6P2C8 311 aa18.32■□□□□ 0.52
SREBF1-216ENST00000490796 CEP128Q6ZU80 1094 aa18.32■□□□□ 0.52
SREBF1-216ENST00000490796 RASL10BQ96S79 203 aa18.32■□□□□ 0.52
SREBF1-216ENST00000490796 CENPKQ9BS16 269 aa18.32■□□□□ 0.52
SREBF1-216ENST00000490796 TRIM8Q9BZR9 551 aa18.32■□□□□ 0.52
SREBF1-216ENST00000490796 TP63Q9H3D4 680 aaPredicted RBP18.32■□□□□ 0.52
SREBF1-216ENST00000490796 PRDM7Q9NQW5 492 aa18.32■□□□□ 0.52
SREBF1-216ENST00000490796 OPTCQ9UBM4 332 aa18.32■□□□□ 0.52
SREBF1-216ENST00000490796 ANGPTL3Q9Y5C1 460 aa18.32■□□□□ 0.52
SREBF1-216ENST00000490796 CLDN16Q9Y5I7 305 aa18.32■□□□□ 0.52
SREBF1-216ENST00000490796 POLQO75417 2590 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 ADAM10O14672 748 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 RAD51CO43502 376 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 PRAMEF4O60810 478 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 LDB3O75112 727 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 OR6B1O95007 311 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 TBX6O95947 436 aaPredicted RBP18.31■□□□□ 0.52
SREBF1-216ENST00000490796 TGFB1P01137 390 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 CD22P20273 847 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 CPN2P22792 545 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 ATP5A1P25705 553 aaKnown RBP18.31■□□□□ 0.52
SREBF1-216ENST00000490796 CRABP2P29373 138 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 SERPINB1P30740 379 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 SOX3P41225 446 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 KIR3DL1P43629 444 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 PLTPP55058 493 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 CAV1Q03135 178 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 ZKSCAN8Q15776 578 aaPredicted RBP18.31■□□□□ 0.52
SREBF1-216ENST00000490796 PRAMEF9Q5VWM5 478 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 MEX3BQ6ZN04 569 aaKnown RBP18.31■□□□□ 0.52
SREBF1-216ENST00000490796 RGS9BPQ6ZS82 235 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 GK5Q6ZS86 529 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 SLC22A16Q86VW1 577 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 MYLK4Q86YV6 388 aaPredicted RBP18.31■□□□□ 0.52
SREBF1-216ENST00000490796 ACOT4Q8N9L9 421 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 SPATA4Q8NEY3 305 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 OR52N2Q8NGI0 321 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 PTPMT1Q8WUK0 201 aaPredicted RBP18.31■□□□□ 0.52
SREBF1-216ENST00000490796 ASB5Q8WWX0 329 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 CMTM7Q96FZ5 175 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 UBXN10Q96LJ8 280 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 MAPKAP1Q9BPZ7 522 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 SPOCK3Q9BQ16 436 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 MS4A8Q9BY19 250 aa18.31■□□□□ 0.52
SREBF1-216ENST00000490796 FAM166BA8MTA8 275 aa18.3■□□□□ 0.52
SREBF1-216ENST00000490796 K7EPI3 171 aa18.3■□□□□ 0.52
SREBF1-216ENST00000490796 RTCAO00442 366 aaKnown RBP18.3■□□□□ 0.52
SREBF1-216ENST00000490796 HIST1H1TP22492 207 aaPredicted RBP18.3■□□□□ 0.52
SREBF1-216ENST00000490796 STX2P32856 288 aa18.3■□□□□ 0.52
SREBF1-216ENST00000490796 RAP1GDS1P52306 607 aa18.3■□□□□ 0.52
SREBF1-216ENST00000490796 HK2P52789 917 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms