RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 JMJD1CQ15652 2540 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 MPDZO75970 2070 aa7.58□□□□□ -1.2
USP39-216ENST00000490193 TRGV5A0A0B4J1U4 118 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 SDR42E2A6NKP2 422 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 FAM171A2A8MVW0 826 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 CLDN4O14493 209 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 DVL2O14641 736 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 HEXAP06865 529 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 CELA3AP09093 270 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 ENO2P09104 434 aaPredicted RBP7.57□□□□□ -1.2
USP39-216ENST00000490193 INHBBP09529 407 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 UQCRC1P31930 480 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 CEACAM8P31997 349 aaPredicted RBP7.57□□□□□ -1.2
USP39-216ENST00000490193 HNF4AP41235 474 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 KCNJ1P48048 391 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 HNRNPFP52597 415 aaKnown RBP7.57□□□□□ -1.2
USP39-216ENST00000490193 RAB38P57729 211 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 STXBP1P61764 594 aaKnown RBP7.57□□□□□ -1.2
USP39-216ENST00000490193 SNTB1Q13884 538 aaKnown RBP7.57□□□□□ -1.2
USP39-216ENST00000490193 RUNX2Q13950 521 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 SLC10A1Q14973 349 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 ZNF750Q32MQ0 723 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 TOR1AIP1Q5JTV8 583 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 ANKRD22Q5VYY1 191 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 POMZP3Q6PJE2 187 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 PAQR3Q6TCH7 311 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 OPN5Q6U736 354 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 SEM1Q6ZVN7 128 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 ZNF595Q8IYB9 648 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 ULK2Q8IYT8 1036 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 FBXW8Q8N3Y1 598 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 C2CD4AQ8NCU7 369 aaPredicted RBP7.57□□□□□ -1.2
USP39-216ENST00000490193 MORN4Q8NDC4 146 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 TMEM52Q8NDY8 209 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 MCUQ8NE86 351 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 DAZLQ92904 295 aaKnown RBP7.57□□□□□ -1.2
USP39-216ENST00000490193 SLCO2A1Q92959 643 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 LINGO1Q96FE5 620 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 LRRC46Q96FV0 321 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 PWWP2AQ96N64 755 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 MDFIQ99750 246 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 SMR3AQ99954 134 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 AIF1LQ9BQI0 150 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 FAM167BQ9BTA0 163 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 RHBGQ9H310 441 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 ZNF703Q9H7S9 590 aaPredicted RBP7.57□□□□□ -1.2
USP39-216ENST00000490193 PLEKHF2Q9H8W4 249 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 LIN28AQ9H9Z2 209 aaKnown RBP7.57□□□□□ -1.2
USP39-216ENST00000490193 XAB2Q9HCS7 855 aaKnown RBP7.57□□□□□ -1.2
USP39-216ENST00000490193 SH2D2AQ9NP31 389 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 SACM1LQ9NTJ5 587 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 C20orf96Q9NUD7 363 aaPredicted RBP7.57□□□□□ -1.2
USP39-216ENST00000490193 QPCTLQ9NXS2 382 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 TUBA8Q9NY65 449 aaPredicted RBP7.57□□□□□ -1.2
USP39-216ENST00000490193 SPRR3Q9UBC9 169 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 ZNF629Q9UEG4 869 aaPredicted RBP7.57□□□□□ -1.2
USP39-216ENST00000490193 MRPS33Q9Y291 106 aaKnown RBP7.57□□□□□ -1.2
USP39-216ENST00000490193 ATG4BQ9Y4P1 393 aa7.57□□□□□ -1.2
USP39-216ENST00000490193 ATP6AP2A0A1C7CYW4 349 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 PABPN1LA6NDY0 278 aaKnown RBP7.56□□□□□ -1.2
USP39-216ENST00000490193 G3V3Y1 287 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 WWP2O00308 870 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 CYR61O00622 381 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 ZNF354AO60765 605 aaPredicted RBP7.56□□□□□ -1.2
USP39-216ENST00000490193 ATP6AP2O75787 350 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 P04436 131 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 FREM3P0C091 2139 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 CCL3P10147 92 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 EPXP11678 715 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 GSTM2P28161 218 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 ADSLP30566 484 aaPredicted RBP7.56□□□□□ -1.2
USP39-216ENST00000490193 HNRNPH1P31943 449 aaKnown RBP7.56□□□□□ -1.2
USP39-216ENST00000490193 TIMP3P35625 211 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 DNASE1L1P49184 302 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 CDKN2DP55273 166 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 IL2P60568 153 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 RNF4P78317 190 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 BTN3A2P78410 334 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 CCZ1BP86790 482 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 CCZ1P86791 482 aaPredicted RBP7.56□□□□□ -1.2
USP39-216ENST00000490193 SORDQ00796 357 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 TBL3Q12788 808 aaKnown RBP7.56□□□□□ -1.2
USP39-216ENST00000490193 SLC13A2Q13183 592 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 KEAP1Q14145 624 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 PPP1R3AQ16821 1122 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 ADPRMQ3LIE5 342 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 HSP90AA5PQ58FG0 334 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 SHEQ5VZ18 495 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 NXPE4Q6UWF7 544 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 SBSNQ6UWP8 590 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 CLEC9AQ6UXN8 241 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 FAM47EQ6ZV65 393 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 TAOK1Q7L7X3 1001 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 GALNT7Q86SF2 657 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 AGGF1Q8N302 714 aaeCLIP7.56□□□□□ -1.2
USP39-216ENST00000490193 LRRC25Q8N386 305 aaPredicted RBP7.56□□□□□ -1.2
USP39-216ENST00000490193 NAXEQ8NCW5 288 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 TTLQ8NG68 377 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 OR14A16Q8NHC5 309 aa7.56□□□□□ -1.2
USP39-216ENST00000490193 PTPMT1Q8WUK0 201 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms