RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 SHBGP04278 402 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 PDHA1P08559 390 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 CD48P09326 243 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 PECAM1P16284 738 aaPredicted RBP6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 LSP1P33241 339 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 UGT2B10P36537 528 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 SARNPP82979 210 aaKnown RBP6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 PDIA2Q13087 525 aaKnown RBP6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 SLC10A1Q14973 349 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 PDK1Q15118 436 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 DPYSL2Q16555 572 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 PGGHGQ32M88 737 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 ARMC12Q5T9G4 340 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 RNASEH2BQ5TBB1 312 aaKnown RBP6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 SLC9A4Q6AI14 798 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 GPSM1Q86YR5 675 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 PALM2Q8IXS6 379 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 SVOPLQ8N434 492 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 PLD5Q8N7P1 536 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 FAM71DQ8N9W8 422 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 PSD4Q8NDX1 1056 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 OR52E1Q8NGJ3 308 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 BCAS4Q8TDM0 211 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 EPS8L3Q8TE67 593 aaKnown RBP6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 PYROXD1Q8WU10 500 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 METTL21AQ8WXB1 218 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 MAML1Q92585 1016 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 CENPIQ92674 756 aaPredicted RBP6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 ITPKCQ96DU7 683 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 RMDN2Q96LZ7 410 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 CCDC138Q96M89 665 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 CITED1Q99966 193 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 GATA5Q9BWX5 397 aaPredicted RBP6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 SPATA16Q9BXB7 569 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 NSRP1Q9H0G5 558 aaKnown RBP6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 PIGMQ9H3S5 423 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 EXO5Q9H790 373 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 NOD2Q9HC29 1040 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 AURKAIP1Q9NWT8 199 aaPredicted RBP6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 NINJ2Q9NZG7 142 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 SAE1Q9UBE0 346 aaPredicted RBP6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 B3GALT5Q9Y2C3 310 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 NCKAP5O14513 1909 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 MED12LQ86YW9 2145 aa6.83□□□□□ -1.32
EXOSC3-206ENST00000489414 A0A1W2PP18 115 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 FZD6O60353 706 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 PDE5AO76074 875 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 CLDN9O95484 217 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 TSPAN15O95858 294 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 THBDP07204 575 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 ZSCAN5DPP0CG00 497 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 RPL22P35268 128 aaKnown RBP6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 CD79BP40259 229 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 SLCO1A2P46721 670 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 RENBPP51606 427 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 IRX1P78414 480 aaPredicted RBP6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 GUCY1A3Q02108 690 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 KRT33BQ14525 404 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 RFTN1Q14699 578 aaPredicted RBP6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 KCTD19Q17RG1 926 aaPredicted RBP6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 KLHL38Q2WGJ6 581 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 PDPK2PQ6A1A2 396 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 TRNP1Q6NT89 227 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 NXPE4Q6UWF7 544 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 CYP4V2Q6ZWL3 525 aaPredicted RBP6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 ZC3H7AQ8IWR0 971 aaKnown RBP6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 ZBED8Q8IZ13 594 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 CNPY4Q8N129 248 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 ARMC10Q8N2F6 343 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 BEND7Q8N7W2 519 aaPredicted RBP6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 C9orf106Q8NAJ2 232 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 ELP5Q8TE02 316 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 DYDC1Q8WWB3 177 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 WFDC12Q8WWY7 111 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 GTF3AQ92664 365 aaKnown RBP6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 NUDCD1Q96RS6 583 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 SERINC2Q96SA4 455 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 TBX15Q96SF7 602 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 ZSCAN5AQ9BUG6 496 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 VN1R1Q9GZP7 353 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 XKR8Q9H6D3 395 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 IL1RL2Q9HB29 575 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 MKKSQ9NPJ1 570 aaPredicted RBP6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 TIMMDC1Q9NPL8 285 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 RAB6BQ9NRW1 208 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 INTS9Q9NV88 658 aaKnown RBP6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 SPHK1Q9NYA1 384 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 NKIRAS1Q9NYS0 192 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 PKD2L2Q9NZM6 624 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 SENP1Q9P0U3 644 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 C19orf25Q9UFG5 118 aaPredicted RBP6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 LGALS13Q9UHV8 139 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 FZD10Q9ULW2 581 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 USP22Q9UPT9 525 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 IKBKGQ9Y6K9 419 aa6.82□□□□□ -1.32
EXOSC3-206ENST00000489414 IGHV4-61A0A0C4DH41 118 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 FEZF1A0PJY2 475 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 GMNCA6NCL1 334 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 GOLGA8MH3BSY2 632 aa6.81□□□□□ -1.32
EXOSC3-206ENST00000489414 EEF2KO00418 725 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms