RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 ZNF419Q96HQ0 510 aaPredicted RBP3.13□□□□□ -1.91
PRPF4-203ENST00000488937 C8orf76Q96K31 380 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 C7orf34Q96L11 122 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 SGK494Q96LW2 274 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 VPS35Q96QK1 796 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 PINK1Q9BXM7 581 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 GANQ9H2C0 597 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 SEMA6AQ9H2E6 1030 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 ARRDC1-AS1Q9H2J1 176 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 C5orf66Q9H5L9 145 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 C10orf88Q9H8K7 445 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 MEAF6Q9HAF1 191 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 CYP3A43Q9HB55 503 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 SGK2Q9HBY8 427 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 PDGFCQ9NRA1 345 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 DDX28Q9NUL7 540 aaKnown RBP3.13□□□□□ -1.91
PRPF4-203ENST00000488937 EXOC1Q9NV70 894 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 PKD2L2Q9NZM6 624 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 FBXL2Q9UKC9 423 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 ZNF490Q9ULM2 529 aaPredicted RBP3.13□□□□□ -1.91
PRPF4-203ENST00000488937 ERVK-19Q9WJR5 959 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 STK38LQ9Y2H1 464 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 TMED7Q9Y3B3 224 aa3.13□□□□□ -1.91
PRPF4-203ENST00000488937 KLF2Q9Y5W3 355 aaPredicted RBP3.13□□□□□ -1.91
PRPF4-203ENST00000488937 AKNAQ7Z591 1439 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 LOC105371242A0A075B767 164 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 A0A1W2PPC1 479 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 OR6C74A6NCV1 312 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 ANTXRLA6NF34 631 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 KCNU1A8MYU2 1149 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 NPIPA2E9PIF3 369 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 M0R296 226 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 FOXE1O00358 373 aaPredicted RBP3.12□□□□□ -1.91
PRPF4-203ENST00000488937 CHUKO15111 745 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 ZSCAN12O43309 604 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 TRIM3O75382 744 aaPredicted RBP3.12□□□□□ -1.91
PRPF4-203ENST00000488937 TM7SF2O76062 418 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 YEATS4O95619 227 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 CAVIN2O95810 425 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 GNA14O95837 355 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 CRYGBP07316 175 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 FHP07954 510 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 CHRM5P08912 532 aaPredicted RBP3.12□□□□□ -1.91
PRPF4-203ENST00000488937 CYP19A1P11511 503 aaPredicted RBP3.12□□□□□ -1.91
PRPF4-203ENST00000488937 GOT1P17174 413 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 MX1P20591 662 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 NT5EP21589 574 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 UCP1P25874 307 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 CD1BP29016 333 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 BDKRB2P30411 391 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 SSTR1P30872 391 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 DUTP33316 252 aaKnown RBP3.12□□□□□ -1.91
PRPF4-203ENST00000488937 NUP62P37198 522 aaPredicted RBP3.12□□□□□ -1.91
PRPF4-203ENST00000488937 LEPRP48357 1165 aaKnown RBP3.12□□□□□ -1.91
PRPF4-203ENST00000488937 PPP3CCP48454 512 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 SP3Q02447 781 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 NCBP1Q09161 790 aaKnown RBP3.12□□□□□ -1.91
PRPF4-203ENST00000488937 PLA2G7Q13093 441 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 DNAJC3Q13217 504 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 ZRSR1Q15695 479 aaKnown RBP3.12□□□□□ -1.91
PRPF4-203ENST00000488937 HKDC1Q2TB90 917 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 LINC01620Q4KN68 170 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 GPAT3Q53EU6 434 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 CTSL3PQ5NE16 218 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 LIPKQ5VXJ0 399 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 CAPN13Q6MZZ7 669 aaPredicted RBP3.12□□□□□ -1.91
PRPF4-203ENST00000488937 KIAA1161Q6NSJ0 714 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 CEP85Q6P2H3 762 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 C6orf89Q6UWU4 347 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 KDM7AQ6ZMT4 941 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 ERO1BQ86YB8 467 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 VSTM4Q8IW00 320 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 FAM114A1Q8IWE2 563 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 CHERPQ8IWX8 916 aaKnown RBP3.12□□□□□ -1.91
PRPF4-203ENST00000488937 KATNAL2Q8IYT4 538 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 CPSF7Q8N684 471 aaKnown RBP3.12□□□□□ -1.91
PRPF4-203ENST00000488937 SPATA4Q8NEY3 305 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 OR4K1Q8NGD4 311 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 OR5R1Q8NH85 324 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 PNPT1Q8TCS8 783 aaKnown RBP3.12□□□□□ -1.91
PRPF4-203ENST00000488937 GIPC3Q8TF64 312 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 SPRYD4Q8WW59 207 aaPredicted RBP3.12□□□□□ -1.91
PRPF4-203ENST00000488937 DNAAF4Q8WXU2 420 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 OR1E3Q8WZA6 343 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 MCUR1Q96AQ8 359 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 EFHD2Q96C19 240 aaPredicted RBP3.12□□□□□ -1.91
PRPF4-203ENST00000488937 ZNF707Q96C28 371 aaPredicted RBP3.12□□□□□ -1.91
PRPF4-203ENST00000488937 HAVCR1Q96D42 359 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 IGSF21Q96ID5 467 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 ZNF396Q96N95 335 aaPredicted RBP3.12□□□□□ -1.91
PRPF4-203ENST00000488937 NDNQ99608 321 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 CHRDL1Q9BU40 450 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 TRMT61BQ9BVS5 477 aaKnown RBP3.12□□□□□ -1.91
PRPF4-203ENST00000488937 VN1R1Q9GZP7 353 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 DNTTIP1Q9H147 329 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 CLK4Q9HAZ1 481 aaKnown RBP3.12□□□□□ -1.91
PRPF4-203ENST00000488937 CNGB3Q9NQW8 809 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 AGPAT3Q9NRZ7 376 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 GKN1Q9NS71 199 aa3.12□□□□□ -1.91
PRPF4-203ENST00000488937 SMOXQ9NWM0 555 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms