RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 TM4SF19Q96DZ7 209 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 CNDP2Q96KP4 475 aaKnown RBP12.08□□□□□ -0.48
NELFE-209ENST00000488426 TEFMQ96QE5 360 aaKnown RBP12.08□□□□□ -0.48
NELFE-209ENST00000488426 C17orf62Q9BQA9 187 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 KAT8Q9H7Z6 458 aaKnown RBP12.08□□□□□ -0.48
NELFE-209ENST00000488426 SLC6A13Q9NSD5 602 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 PILRAQ9UKJ1 303 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 POMT2Q9UKY4 750 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 ZMIZ1Q9ULJ6 1067 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 CSNK1G3Q9Y6M4 447 aa12.08□□□□□ -0.48
NELFE-209ENST00000488426 PKD1L2Q7Z442 2459 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 EVPLLA8MZ36 301 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 NVLO15381 856 aaKnown RBP12.07□□□□□ -0.48
NELFE-209ENST00000488426 ERI3O43414 337 aaKnown RBP12.07□□□□□ -0.48
NELFE-209ENST00000488426 TMPRSS11DO60235 418 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 GUCY1B2O75343 617 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 BAG2O95816 211 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 B3GALT4O96024 378 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 ATP6V1B2P21281 511 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 HIST1H1TP22492 207 aaPredicted RBP12.07□□□□□ -0.48
NELFE-209ENST00000488426 PPIBP23284 216 aaKnown RBP12.07□□□□□ -0.48
NELFE-209ENST00000488426 PLA2G16P53816 162 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 SESN3P58005 492 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 MC1RQ01726 317 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 FBXO42Q6P3S6 717 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 CYP2R1Q6VVX0 501 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 RNF44Q7L0R7 432 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 CLECL1Q8IZS7 167 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 OR2T12Q8NG77 320 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 FAM210AQ96ND0 272 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 ZNF583Q96ND8 569 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 OR2A5Q96R48 311 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 ZFYVE21Q9BQ24 234 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 KLHL31Q9H511 634 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 IKZF5Q9H5V7 419 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 C6orf203Q9P0P8 240 aaPredicted RBP12.07□□□□□ -0.48
NELFE-209ENST00000488426 ZNF282Q9UDV7 671 aaPredicted RBP12.07□□□□□ -0.48
NELFE-209ENST00000488426 FTSJ1Q9UET6 329 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 EGFL7Q9UHF1 273 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 RALYQ9UKM9 306 aaKnown RBP12.07□□□□□ -0.48
NELFE-209ENST00000488426 ZFYVE26Q68DK2 2539 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 NBEAQ8NFP9 2946 aa12.07□□□□□ -0.48
NELFE-209ENST00000488426 URADA6NGE7 173 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 FAM220BPB1ANY3 271 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 CASC3O15234 703 aaKnown RBP12.06□□□□□ -0.48
NELFE-209ENST00000488426 PPM1DO15297 605 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 SIGLEC6O43699 453 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 CTSVO60911 334 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 UBXN7O94888 489 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 SCELO95171 688 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 LDOC1O95751 146 aaPredicted RBP12.06□□□□□ -0.48
NELFE-209ENST00000488426 GSNP06396 782 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 DRD2P14416 443 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 SLC7A1P30825 629 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 VHLP40337 213 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 ABHD18Q0P651 414 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 MAP7Q14244 749 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 SLC9A5Q14940 896 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 MUM1Q2TAK8 710 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 C14orf28Q4W4Y0 310 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 ZNF621Q6ZSS3 439 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 TMPRSS7Q7RTY8 843 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 CALHM3Q86XJ0 350 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 ZNF761Q86XN6 746 aaPredicted RBP12.06□□□□□ -0.48
NELFE-209ENST00000488426 TICAM1Q8IUC6 712 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 FAM47BQ8NA70 645 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 CAMKVQ8NCB2 501 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 OR10A6Q8NH74 314 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 RSC1A1Q92681 617 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 FAIM2Q9BWQ8 316 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 ROGDIQ9GZN7 287 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 ABCG4Q9H172 646 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 SEMA6CQ9H3T2 930 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 SYNPO2LQ9H987 977 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 PRDM7Q9NQW5 492 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 EVA1BQ9NVM1 165 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 EHD3Q9NZN3 535 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 VPS4AQ9UN37 437 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 PCDHGB4Q9UN71 923 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 CORO2BQ9UQ03 480 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 CLIC1O00299 241 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 CPSF4O95639 269 aaKnown RBP12.06□□□□□ -0.48
NELFE-209ENST00000488426 GPIP06744 558 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 FAM58BPP0C7Q3 252 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 GGT1P19440 569 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 ATP5A1P25705 553 aaKnown RBP12.06□□□□□ -0.48
NELFE-209ENST00000488426 CAPZBP47756 277 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 LSSP48449 732 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 OR4D2P58180 307 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 DEFB133Q30KQ1 61 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 MTX3Q5HYI7 312 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 MANEAQ5SRI9 462 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 MRM1Q6IN84 353 aaKnown RBP12.06□□□□□ -0.48
NELFE-209ENST00000488426 ZNF793Q6ZN11 406 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 TMEM126BQ8IUX1 230 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 PQLC1Q8N2U9 271 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 ZNF655Q8N720 491 aaPredicted RBP12.06□□□□□ -0.48
NELFE-209ENST00000488426 TRIML2Q8N7C3 387 aa12.06□□□□□ -0.48
NELFE-209ENST00000488426 KDF1Q8NAX2 398 aaPredicted RBP12.06□□□□□ -0.48
NELFE-209ENST00000488426 OR4A15Q8NGL6 344 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms