RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 PCED1BQ96HM7 432 aa2.35□□□□□ -2.03
R3HDM1-219ENST00000488035 SPATA13Q96N96 652 aa2.35□□□□□ -2.03
R3HDM1-219ENST00000488035 AGAP3Q96P47 875 aa2.35□□□□□ -2.03
R3HDM1-219ENST00000488035 PRAM1Q96QH2 718 aa2.35□□□□□ -2.03
R3HDM1-219ENST00000488035 DCTN5Q9BTE1 182 aa2.35□□□□□ -2.03
R3HDM1-219ENST00000488035 CCDC28BQ9BUN5 200 aa2.35□□□□□ -2.03
R3HDM1-219ENST00000488035 LRRC61Q9BV99 259 aa2.35□□□□□ -2.03
R3HDM1-219ENST00000488035 NUSAP1Q9BXS6 441 aaKnown RBP2.35□□□□□ -2.03
R3HDM1-219ENST00000488035 LRRC2Q9BYS8 371 aa2.35□□□□□ -2.03
R3HDM1-219ENST00000488035 TRIM7Q9C029 511 aa2.35□□□□□ -2.03
R3HDM1-219ENST00000488035 RSPH9Q9H1X1 276 aaPredicted RBP2.35□□□□□ -2.03
R3HDM1-219ENST00000488035 DPEP3Q9H4B8 488 aa2.35□□□□□ -2.03
R3HDM1-219ENST00000488035 AKIRIN1Q9H9L7 192 aaPredicted RBP2.35□□□□□ -2.03
R3HDM1-219ENST00000488035 MAGEF1Q9HAY2 307 aa2.35□□□□□ -2.03
R3HDM1-219ENST00000488035 PLEKHA3Q9HB20 300 aa2.35□□□□□ -2.03
R3HDM1-219ENST00000488035 PAK5Q9P286 719 aa2.35□□□□□ -2.03
R3HDM1-219ENST00000488035 ZNF319Q9P2F9 582 aa2.35□□□□□ -2.03
R3HDM1-219ENST00000488035 EXOC6BQ9Y2D4 811 aa2.35□□□□□ -2.03
R3HDM1-219ENST00000488035 RNF215Q9Y6U7 377 aa2.35□□□□□ -2.03
R3HDM1-219ENST00000488035 RNF123Q5XPI4 1314 aa2.35□□□□□ -2.03
R3HDM1-219ENST00000488035 IGHV3OR16-10A0A075B7F0 116 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 IGHV4-30-2A0A087WSY4 118 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 TRBV5-4A0A0C4DH59 114 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 A0A0J9YWU9 116 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 ARHGEF33A8MVX0 844 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 K7EQG2 157 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 CACNB4O00305 520 aaPredicted RBP2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 TFECO14948 347 aaPredicted RBP2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 CSO75390 466 aaKnown RBP2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 CXCL14O95715 111 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 CPNE6O95741 557 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 FGF19O95750 216 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 OLFM2O95897 454 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 EPOP01588 193 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 IGHG3P01860 377 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 THEGLP0DJG4 465 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 CPA3P15088 417 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 CD1DP15813 335 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 GLRA1P23415 457 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 ID1P41134 155 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 ATP4BP51164 291 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 PEX3P56589 373 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 RPS27AP62979 156 aaKnown RBP2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 MFGE8Q08431 387 aaPredicted RBP2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 NPRL3Q12980 569 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 LCP2Q13094 533 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 PDE7AQ13946 482 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 GIT2Q14161 759 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 ZNF146Q15072 292 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 LPAL2Q16609 132 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 UPP1Q16831 310 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 FUT11Q495W5 492 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 GLIPR1L2Q4G1C9 344 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 DCAF12Q5T6F0 453 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 CAPN13Q6MZZ7 669 aaPredicted RBP2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 PLBD1Q6P4A8 553 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 GPRIN3Q6ZVF9 776 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 MCM10Q7L590 875 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 CARM1Q86X55 608 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 FAM131BQ86XD5 332 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 ZNF440Q8IYI8 595 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 Q8N377 158 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 RELL2Q8NC24 303 aaPredicted RBP2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 CCDC197Q8NCU1 140 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 MSANTD4Q8NCY6 345 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 OR4A16Q8NH70 328 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 C8orf46Q8TAG6 207 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 MGARPQ8TDB4 240 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 UBTD2Q8WUN7 234 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 PRCCQ92733 491 aaPredicted RBP2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 NABP1Q96AH0 204 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 MRPL53Q96EL3 112 aaKnown RBP2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 CXorf58Q96LI9 332 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 ATOH8Q96SQ7 321 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 LGMNQ99538 433 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 SSX3Q99909 188 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 AGPAT1Q99943 283 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 ZNF577Q9BSK1 485 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 ACAT2Q9BWD1 397 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 PINK1Q9BXM7 581 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 S100A14Q9HCY8 104 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 MED17Q9NVC6 651 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 PLEK2Q9NYT0 353 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 TECRQ9NZ01 308 aaKnown RBP2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 ZNF346Q9UL40 294 aaKnown RBP2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 FOXA2Q9Y261 457 aaPredicted RBP2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 ZHX2Q9Y6X8 837 aa2.34□□□□□ -2.03
R3HDM1-219ENST00000488035 GON4LQ3T8J9 2241 aa2.33□□□□□ -2.04
R3HDM1-219ENST00000488035 LOC390937A0A1W2PQ73 354 aa2.33□□□□□ -2.04
R3HDM1-219ENST00000488035 OR5H15A6NDH6 313 aa2.33□□□□□ -2.04
R3HDM1-219ENST00000488035 TRIM64A6NGJ6 449 aa2.33□□□□□ -2.04
R3HDM1-219ENST00000488035 TRIM64BA6NI03 449 aa2.33□□□□□ -2.04
R3HDM1-219ENST00000488035 ZNF724A8MTY0 619 aa2.33□□□□□ -2.04
R3HDM1-219ENST00000488035 E9PQ18 207 aa2.33□□□□□ -2.04
R3HDM1-219ENST00000488035 TLR4O00206 839 aa2.33□□□□□ -2.04
R3HDM1-219ENST00000488035 KERAO60938 352 aa2.33□□□□□ -2.04
R3HDM1-219ENST00000488035 MTRF1O75570 445 aaKnown RBP2.33□□□□□ -2.04
R3HDM1-219ENST00000488035 OR6B1O95007 311 aa2.33□□□□□ -2.04
R3HDM1-219ENST00000488035 LYNP07948 512 aa2.33□□□□□ -2.04
R3HDM1-219ENST00000488035 ANPEPP15144 967 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms