RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 GSTA4O15217 222 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 ZSCAN9O15535 394 aaPredicted RBP8.94□□□□□ -0.98
SF3B1-211ENST00000487698 HRO43593 1189 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 PRKRAO75569 313 aaKnown RBP8.94□□□□□ -0.98
SF3B1-211ENST00000487698 CREG1O75629 220 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 CDH3P22223 829 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 ARRB1P49407 418 aaPredicted RBP8.94□□□□□ -0.98
SF3B1-211ENST00000487698 BTN3A2P78410 334 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 SUZ12Q15022 739 aaKnown RBP8.94□□□□□ -0.98
SF3B1-211ENST00000487698 VMACQ2NL98 169 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 CMPK2Q5EBM0 449 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 TBCELQ5QJ74 424 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.94□□□□□ -0.98
SF3B1-211ENST00000487698 TMEM214Q6NUQ4 689 aaKnown RBP8.94□□□□□ -0.98
SF3B1-211ENST00000487698 ERMP1Q7Z2K6 904 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 SLC35F3Q8IY50 421 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 ARHGEF39Q8N4T4 335 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 LRTOMTQ8WZ04 291 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 ZBED6CLQ96FA7 236 aaPredicted RBP8.94□□□□□ -0.98
SF3B1-211ENST00000487698 SERINC2Q96SA4 455 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 MAPKAP1Q9BPZ7 522 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 SLC35C2Q9NQQ7 365 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 AGPAT4Q9NRZ5 378 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 C1GALT1Q9NS00 363 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 SIRT3Q9NTG7 399 aaPredicted RBP8.94□□□□□ -0.98
SF3B1-211ENST00000487698 OLAHQ9NV23 265 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 KCMF1Q9P0J7 381 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 EPHA6Q9UF33 1036 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 AURKCQ9UQB9 309 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 RNF215Q9Y6U7 377 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 UNC13CQ8NB66 2214 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 TTC28Q96AY4 2481 aa8.94□□□□□ -0.98
SF3B1-211ENST00000487698 SCN2AQ99250 2005 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 SLC9B1P1A6NJY1 282 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 HNRNPRO43390 633 aaKnown RBP8.93□□□□□ -0.98
SF3B1-211ENST00000487698 NUDT21O43809 227 aaKnown RBP8.93□□□□□ -0.98
SF3B1-211ENST00000487698 GMNNO75496 209 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 TNFRSF21O75509 655 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 TIPRLO75663 272 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 NUDT7P0C024 238 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 ALOX12P18054 663 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 IL1RNP18510 177 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 IL10P22301 178 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 UQCRC2P22695 453 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 EPHA8P29322 1005 aaPredicted RBP8.93□□□□□ -0.98
SF3B1-211ENST00000487698 GABRA4P48169 554 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 VAC14Q08AM6 782 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 FADDQ13158 208 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 VEZF1Q14119 521 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 MAP7Q14244 749 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 NR1D2Q14995 579 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 C16orf72Q14CZ0 275 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 CEBPEQ15744 281 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 DEFB134Q4QY38 66 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 C18orf63Q68DL7 685 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 IRGCQ6NXR0 463 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 ZCCHC8Q6NZY4 707 aaKnown RBP8.93□□□□□ -0.98
SF3B1-211ENST00000487698 SLC48A1Q6P1K1 146 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 IZUMO2Q6UXV1 221 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 ABHD13Q7L211 337 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 DNAJC22Q8N4W6 341 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 ZNF655Q8N720 491 aaPredicted RBP8.93□□□□□ -0.98
SF3B1-211ENST00000487698 CSNK1A1LQ8N752 337 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 FAM86B1Q8N7N1 296 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 OR52N2Q8NGI0 321 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 ZCCHC10Q8TBK6 192 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 DNAJC9Q8WXX5 260 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 ZC3H10Q96K80 434 aaKnown RBP8.93□□□□□ -0.98
SF3B1-211ENST00000487698 AMDHD1Q96NU7 426 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 ZNF184Q99676 751 aaPredicted RBP8.93□□□□□ -0.98
SF3B1-211ENST00000487698 MAP3K3Q99759 626 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 DPH2Q9BQC3 489 aaPredicted RBP8.93□□□□□ -0.98
SF3B1-211ENST00000487698 KLHL4Q9C0H6 718 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 CHRNA10Q9GZZ6 450 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 VCX3BQ9H321 246 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 IL21RQ9HBE5 538 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 DCAF13Q9NV06 445 aaKnown RBP8.93□□□□□ -0.98
SF3B1-211ENST00000487698 UTS2RQ9UKP6 389 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 FBXO4Q9UKT5 387 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 FBXW2Q9UKT8 454 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 ACSL6Q9UKU0 697 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 TLCD2A6NGC4 264 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 GLOD5A6NK44 160 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 WASHC1A8K0Z3 465 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 RHPN2P1A8MT19 583 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 MYO1GB0I1T2 1018 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 PGRMC2O15173 223 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 NTRK1P04629 796 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 NR2F6P10588 404 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 BMP2P12643 396 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 MANFP55145 182 aaKnown RBP8.93□□□□□ -0.98
SF3B1-211ENST00000487698 GFERP55789 205 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 VSX2P58304 361 aaPredicted RBP8.93□□□□□ -0.98
SF3B1-211ENST00000487698 TNFRSF17Q02223 184 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 BIRC2Q13490 618 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 RUNX2Q13950 521 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 NKG7Q16617 165 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 LRRC36Q1X8D7 754 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 COX20Q5RI15 118 aa8.93□□□□□ -0.98
SF3B1-211ENST00000487698 SAXO2Q658L1 398 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms