RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 RIIAD1A6NNX1 92 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 PRR23D1E9PI22 279 aaPredicted RBP11.29□□□□□ -0.6
TRA2B-214ENST00000487615 ZNF701M0R085 212 aaPredicted RBP11.29□□□□□ -0.6
TRA2B-214ENST00000487615 LILRB3O75022 631 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 OR6A2O95222 327 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 KLF8O95600 359 aaPredicted RBP11.29□□□□□ -0.6
TRA2B-214ENST00000487615 PRR23D2P0DMB1 279 aaPredicted RBP11.29□□□□□ -0.6
TRA2B-214ENST00000487615 NTSR1P30989 418 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 HOXA9P31269 272 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 MC1RQ01726 317 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 MXD1Q05195 221 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 ST3GAL4Q11206 333 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 SLC13A2Q13183 592 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 ARHGAP19Q14CB8 494 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 EOGTQ5NDL2 527 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 CLEC12AQ5QGZ9 265 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 MZT2BQ6NZ67 158 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 FAM131AQ6UXB0 335 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 GPR135Q8IZ08 494 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 FAM98AQ8NCA5 519 aaKnown RBP11.29□□□□□ -0.6
TRA2B-214ENST00000487615 CIDECQ96AQ7 238 aaPredicted RBP11.29□□□□□ -0.6
TRA2B-214ENST00000487615 FUNDC2Q9BWH2 189 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 GSDMCQ9BYG8 508 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 MYNNQ9NPC7 610 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 OLAHQ9NV23 265 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 F5P12259 2224 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 C17orf113A0A1B0GUU1 675 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 C1orf226A1L170 272 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 NPC1O15118 1278 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 TLX2O43763 284 aaPredicted RBP11.29□□□□□ -0.6
TRA2B-214ENST00000487615 TNFP01375 233 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 CHRM5P08912 532 aaPredicted RBP11.29□□□□□ -0.6
TRA2B-214ENST00000487615 TNFRSF1BP20333 461 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 CCDC92Q53HC0 331 aaPredicted RBP11.29□□□□□ -0.6
TRA2B-214ENST00000487615 CBLL1Q75N03 491 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 TMEM19Q96HH6 336 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 WDR92Q96MX6 357 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 CDH7Q9ULB5 785 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 ENPP4Q9Y6X5 453 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 TBX1O43435 398 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 B4GAT1O43505 415 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 LATO43561 262 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 PSIP1O75475 530 aaKnown RBP11.29□□□□□ -0.6
TRA2B-214ENST00000487615 CDK3Q00526 305 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 COX10Q12887 443 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 NFATC3Q12968 1075 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 CDK5R2Q13319 367 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 OR4C11Q6IEV9 310 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 FAM180BQ6P0A1 224 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 LUZP2Q86TE4 346 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 IQCHQ86VS3 1027 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 SLC5A8Q8N695 610 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 TCEANCQ8N8B7 351 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 WDR48Q8TAF3 677 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 DUS3LQ96G46 650 aaKnown RBP11.29□□□□□ -0.6
TRA2B-214ENST00000487615 FAM83CQ9BQN1 747 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 SLITRK2Q9H156 845 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 MS4A12Q9NXJ0 267 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 CAB39Q9Y376 341 aaPredicted RBP11.29□□□□□ -0.6
TRA2B-214ENST00000487615 WDR45Q9Y484 360 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 IRAK3Q9Y616 596 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 CEPT1Q9Y6K0 416 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 AP1M2Q9Y6Q5 423 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 SDK1Q7Z5N4 2213 aa11.29□□□□□ -0.6
TRA2B-214ENST00000487615 FAAHO00519 579 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 SNPHO15079 494 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 HMGN1P05114 100 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 FHP07954 510 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 GJA8P48165 433 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 TAB1Q15750 504 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 HENMT1Q5T8I9 393 aaKnown RBP11.28□□□□□ -0.6
TRA2B-214ENST00000487615 KIAA1161Q6NSJ0 714 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 PNCKQ6P2M8 343 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 RTL4Q6ZR62 310 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 NRROSQ86YC3 692 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 ART5Q96L15 291 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 SLC38A3Q99624 504 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 LHPPQ9H008 270 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 OR51I1Q9H343 314 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 RC3H2Q9HBD1 1191 aaKnown RBP11.28□□□□□ -0.6
TRA2B-214ENST00000487615 DNAJC27Q9NZQ0 273 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 SPIN1Q9Y657 262 aaPredicted RBP11.28□□□□□ -0.6
TRA2B-214ENST00000487615 PLOD2O00469 737 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 KCNJ13O60928 360 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 STT3AP46977 705 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 CAPZA2P47755 286 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 PFN3P60673 137 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 TSTQ16762 297 aaKnown RBP11.28□□□□□ -0.6
TRA2B-214ENST00000487615 PRRT3Q5FWE3 981 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 SMARCD3Q6STE5 483 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 CXXC5Q7LFL8 322 aaKnown RBP11.28□□□□□ -0.6
TRA2B-214ENST00000487615 KAT2AQ92830 837 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 ECHDC3Q96DC8 303 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 DIRAS2Q96HU8 199 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 C5AR2Q9P296 337 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 DNMT3AQ9Y6K1 912 aaPredicted RBP11.28□□□□□ -0.6
TRA2B-214ENST00000487615 SEMA3DO95025 777 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 POLR2CP19387 275 aaPredicted RBP11.28□□□□□ -0.6
TRA2B-214ENST00000487615 CDKN2CP42773 168 aa11.28□□□□□ -0.6
TRA2B-214ENST00000487615 KEAP1Q14145 624 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms