RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 KCNC2Q96PR1 638 aa22.84■■□□□ 1.25
LIME1-206ENST00000487026 ATOH8Q96SQ7 321 aa22.84■■□□□ 1.25
LIME1-206ENST00000487026 MS4A8Q9BY19 250 aa22.84■■□□□ 1.25
LIME1-206ENST00000487026 NMRAL1Q9HBL8 299 aa22.84■■□□□ 1.25
LIME1-206ENST00000487026 NUDT4Q9NZJ9 180 aa22.84■■□□□ 1.25
LIME1-206ENST00000487026 YARS2Q9Y2Z4 477 aaKnown RBP22.84■■□□□ 1.25
LIME1-206ENST00000487026 CLCA3PQ9Y6N3 262 aa22.84■■□□□ 1.25
LIME1-206ENST00000487026 SAP18O00422 153 aaKnown RBP22.83■■□□□ 1.25
LIME1-206ENST00000487026 TFECO14948 347 aaPredicted RBP22.83■■□□□ 1.25
LIME1-206ENST00000487026 HS6ST1O60243 411 aa22.83■■□□□ 1.25
LIME1-206ENST00000487026 LDB3O75112 727 aa22.83■■□□□ 1.25
LIME1-206ENST00000487026 TGFB1P01137 390 aa22.83■■□□□ 1.25
LIME1-206ENST00000487026 ATP5A1P25705 553 aaKnown RBP22.83■■□□□ 1.25
LIME1-206ENST00000487026 CASP2P42575 452 aa22.83■■□□□ 1.25
LIME1-206ENST00000487026 ID2Q02363 134 aa22.83■■□□□ 1.25
LIME1-206ENST00000487026 RCN2Q14257 317 aa22.83■■□□□ 1.25
LIME1-206ENST00000487026 SYT10Q6XYQ8 523 aa22.83■■□□□ 1.25
LIME1-206ENST00000487026 TBC1D1Q86TI0 1168 aaPredicted RBP22.83■■□□□ 1.25
LIME1-206ENST00000487026 RNF175Q8N4F7 328 aa22.83■■□□□ 1.25
LIME1-206ENST00000487026 ACOT4Q8N9L9 421 aa22.83■■□□□ 1.25
LIME1-206ENST00000487026 POGLUT1Q8NBL1 392 aa22.83■■□□□ 1.25
LIME1-206ENST00000487026 NXNL1Q96CM4 212 aa22.83■■□□□ 1.25
LIME1-206ENST00000487026 RAB17Q9H0T7 212 aa22.83■■□□□ 1.25
LIME1-206ENST00000487026 RUBCNLQ9H714 662 aa22.83■■□□□ 1.25
LIME1-206ENST00000487026 CHST11Q9NPF2 352 aa22.83■■□□□ 1.25
LIME1-206ENST00000487026 VTI1BQ9UEU0 232 aa22.83■■□□□ 1.25
LIME1-206ENST00000487026 ERVK-11Q9UQG0 969 aa22.83■■□□□ 1.25
LIME1-206ENST00000487026 NCOA6Q14686 2063 aaPredicted RBP22.82■■□□□ 1.24
LIME1-206ENST00000487026 WWP2O00308 870 aa22.82■■□□□ 1.24
LIME1-206ENST00000487026 CDC40O60508 579 aaKnown RBP eCLIP22.82■■□□□ 1.24
LIME1-206ENST00000487026 LTA4HP09960 611 aaKnown RBP22.82■■□□□ 1.24
LIME1-206ENST00000487026 TNNI3P19429 210 aa22.82■■□□□ 1.24
LIME1-206ENST00000487026 CRABP2P29373 138 aa22.82■■□□□ 1.24
LIME1-206ENST00000487026 IL20RBQ6UXL0 311 aa22.82■■□□□ 1.24
LIME1-206ENST00000487026 TBCDQ9BTW9 1192 aa22.82■■□□□ 1.24
LIME1-206ENST00000487026 SORBS1Q9BX66 1292 aaKnown RBP22.82■■□□□ 1.24
LIME1-206ENST00000487026 OR8D2Q9GZM6 311 aa22.82■■□□□ 1.24
LIME1-206ENST00000487026 LYRM4Q9HD34 91 aa22.82■■□□□ 1.24
LIME1-206ENST00000487026 DEPPQ9NTK1 212 aa22.82■■□□□ 1.24
LIME1-206ENST00000487026 OPTCQ9UBM4 332 aa22.82■■□□□ 1.24
LIME1-206ENST00000487026 FBN2P35556 2912 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 A0A1B0GTH9 108 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 ESYT3A0FGR9 886 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 C19orf84I3L1E1 186 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 K7EPI3 171 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 PRRG2O14669 202 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 ADAM10O14672 748 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 PDE9AO76083 593 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 OR6B1O95007 311 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 STX2P32856 288 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 NR0B1P51843 470 aaKnown RBP22.81■■□□□ 1.24
LIME1-206ENST00000487026 IRF9Q00978 393 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 SLC7A5Q01650 507 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 E2F2Q14209 437 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 CMPK2Q5EBM0 449 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 MED27Q6P2C8 311 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 HSDL2Q6YN16 418 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 LAS2Q8IYD9 372 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 SRFBP1Q8NEF9 429 aaKnown RBP22.81■■□□□ 1.24
LIME1-206ENST00000487026 OR7G3Q8NG95 312 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 KCTD4Q8WVF5 259 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 DAZLQ92904 295 aaKnown RBP22.81■■□□□ 1.24
LIME1-206ENST00000487026 PHACTR1Q9C0D0 580 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 ROGDIQ9GZN7 287 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 OR51B5Q9H339 312 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 TIMMDC1Q9NPL8 285 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 MYOTQ9UBF9 498 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 ACOT9Q9Y305 439 aa22.81■■□□□ 1.24
LIME1-206ENST00000487026 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.81■■□□□ 1.24
LIME1-206ENST00000487026 PKDREJQ9NTG1 2253 aa22.8■■□□□ 1.24
LIME1-206ENST00000487026 A8MVJ9 347 aa22.8■■□□□ 1.24
LIME1-206ENST00000487026 KERAO60938 352 aa22.8■■□□□ 1.24
LIME1-206ENST00000487026 COX6B1P14854 86 aa22.8■■□□□ 1.24
LIME1-206ENST00000487026 AGAP20933 346 aa22.8■■□□□ 1.24
LIME1-206ENST00000487026 SOX3P41225 446 aa22.8■■□□□ 1.24
LIME1-206ENST00000487026 ETF1P62495 437 aaKnown RBP22.8■■□□□ 1.24
LIME1-206ENST00000487026 GUCY2DQ02846 1103 aa22.8■■□□□ 1.24
LIME1-206ENST00000487026 DDX39BQ13838 428 aaKnown RBP22.8■■□□□ 1.24
LIME1-206ENST00000487026 AP5B1Q2VPB7 878 aa22.8■■□□□ 1.24
LIME1-206ENST00000487026 CHSY3Q70JA7 882 aa22.8■■□□□ 1.24
LIME1-206ENST00000487026 OR4N5Q8IXE1 308 aa22.8■■□□□ 1.24
LIME1-206ENST00000487026 TEX9Q8N6V9 391 aa22.8■■□□□ 1.24
LIME1-206ENST00000487026 MORN4Q8NDC4 146 aa22.8■■□□□ 1.24
LIME1-206ENST00000487026 PSD4Q8NDX1 1056 aa22.8■■□□□ 1.24
LIME1-206ENST00000487026 OR52N2Q8NGI0 321 aa22.8■■□□□ 1.24
LIME1-206ENST00000487026 OR14A16Q8NHC5 309 aa22.8■■□□□ 1.24
LIME1-206ENST00000487026 C16orf52Q8NHV5 167 aa22.8■■□□□ 1.24
LIME1-206ENST00000487026 ASB15Q8WXK1 588 aa22.8■■□□□ 1.24
LIME1-206ENST00000487026 UBE2E3Q969T4 207 aa22.8■■□□□ 1.24
LIME1-206ENST00000487026 ANKRD9Q96BM1 317 aaPredicted RBP22.8■■□□□ 1.24
LIME1-206ENST00000487026 RASL10BQ96S79 203 aa22.8■■□□□ 1.24
LIME1-206ENST00000487026 HPF1Q9NWY4 346 aa22.8■■□□□ 1.24
LIME1-206ENST00000487026 PINLYPA6NC86 204 aa22.79■■□□□ 1.24
LIME1-206ENST00000487026 C17orf105B2RV13 164 aa22.79■■□□□ 1.24
LIME1-206ENST00000487026 CLDN14O95500 239 aa22.79■■□□□ 1.24
LIME1-206ENST00000487026 MTHFD2P13995 350 aa22.79■■□□□ 1.24
LIME1-206ENST00000487026 HIST1H1TP22492 207 aaPredicted RBP22.79■■□□□ 1.24
LIME1-206ENST00000487026 CPN2P22792 545 aa22.79■■□□□ 1.24
LIME1-206ENST00000487026 PTGS2P35354 604 aa22.79■■□□□ 1.24
LIME1-206ENST00000487026 SSR2P43308 183 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms