RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 KLK11Q9UBX7 282 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 TRIM10Q9UDY6 481 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 HOOK1Q9UJC3 728 aaKnown RBP3.9□□□□□ -1.79
SMC4-218ENST00000486711 EXOGQ9Y2C4 368 aaKnown RBP3.9□□□□□ -1.79
SMC4-218ENST00000486711 NEDD4P46934 1319 aa3.9□□□□□ -1.79
SMC4-218ENST00000486711 SPATA31D1Q6ZQQ2 1576 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 ATP6AP2A0A1C7CYW4 349 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 LMO7DNF2Z398 122 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 TLR4O00206 839 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 EEF2KO00418 725 aaKnown RBP3.89□□□□□ -1.79
SMC4-218ENST00000486711 P2RX6O15547 441 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 SEC22BO75396 215 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 CPNE6O95741 557 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 B4GALT1P15291 398 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 CCR4P51679 360 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 LUMP51884 338 aaPredicted RBP3.89□□□□□ -1.79
SMC4-218ENST00000486711 SLC12A3P55017 1021 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 GEMP55040 296 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 CCZ1BP86790 482 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 CCZ1P86791 482 aaPredicted RBP3.89□□□□□ -1.79
SMC4-218ENST00000486711 DRP2Q13474 957 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 TMEM187Q14656 261 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 HEPACAMQ14CZ8 416 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 FAM189A2Q15884 450 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 LCLAT1Q6UWP7 414 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 KIF6Q6ZMV9 814 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 FRRS1Q6ZNA5 592 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 NOTCH2NLQ7Z3S9 236 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 CATSPERDQ86XM0 798 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 ZNF619Q8N2I2 560 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 CCNYQ8ND76 341 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 C8orf46Q8TAG6 207 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 GPR148Q8TDV2 347 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 GLYATL1Q969I3 302 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 SLCO4A1Q96BD0 722 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 SPATA13Q96N96 652 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 PKP2Q99959 881 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 GANQ9H2C0 597 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 KCNK13Q9HB14 408 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 PIGVQ9NUD9 493 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 WIPI2Q9Y4P8 454 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 OR1A2Q9Y585 309 aa3.89□□□□□ -1.79
SMC4-218ENST00000486711 DHX29Q7Z478 1369 aaKnown RBP3.89□□□□□ -1.79
SMC4-218ENST00000486711 ARID2Q68CP9 1835 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 IGLV7-46A0A075B6I9 117 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 MACROD2A1Z1Q3 448 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 KRT87PA6NCN2 255 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 ARHGAP42A6NI28 874 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 INPP4BO15327 924 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 SLC4A1P02730 911 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 ALPPP05187 535 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 SERPINF2P08697 491 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 TPBGLP0DKB5 382 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 CT45A8P0DMV1 189 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 CT45A9P0DMV2 189 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 ALPPL2P10696 532 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 GAP43P17677 238 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 IL10P22301 178 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 AHCYP23526 432 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 MAPK3P27361 379 aaPredicted RBP3.88□□□□□ -1.79
SMC4-218ENST00000486711 PDHA2P29803 388 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 OR1D2P34982 312 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 ALDH3B1P43353 468 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 HNRNPFP52597 415 aaKnown RBP3.88□□□□□ -1.79
SMC4-218ENST00000486711 EVCP57679 992 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 SRP54P61011 504 aaKnown RBP3.88□□□□□ -1.79
SMC4-218ENST00000486711 ERVK-16P61578 105 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 TRADDQ15628 312 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 CCDC40Q4G0X9 1142 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 PARP10Q53GL7 1025 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 CT45A2Q5DJT8 189 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 TRIM65Q6PJ69 517 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 DLEU7Q6UYE1 221 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 Q6ZRP5 223 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 C17orf64Q86WR6 236 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 ZNF614Q8N883 585 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 OR6M1Q8NGM8 313 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 OR10G7Q8NGN6 311 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 ATP8B4Q8TF62 1192 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 CDHR1Q96JP9 859 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 RUNDC3BQ96NL0 473 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 ERGIC2Q96RQ1 377 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 AGPAT1Q99943 283 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 NUSAP1Q9BXS6 441 aaKnown RBP3.88□□□□□ -1.79
SMC4-218ENST00000486711 CARD9Q9H257 536 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 KCNMB3Q9NPA1 279 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 BARHL2Q9NY43 387 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 KCNN3Q9UGI6 736 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 NARFQ9UHQ1 456 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 BAIAP2L1Q9UHR4 511 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 MRTO4Q9UKD2 239 aaKnown RBP3.88□□□□□ -1.79
SMC4-218ENST00000486711 CCPG1Q9ULG6 757 aa3.88□□□□□ -1.79
SMC4-218ENST00000486711 RPH3AQ9Y2J0 694 aaPredicted RBP3.88□□□□□ -1.79
SMC4-218ENST00000486711 MRPS2Q9Y399 296 aaKnown RBP3.88□□□□□ -1.79
SMC4-218ENST00000486711 LOC105371242A0A075B767 164 aa3.87□□□□□ -1.79
SMC4-218ENST00000486711 A0A087X002 238 aa3.87□□□□□ -1.79
SMC4-218ENST00000486711 CCDC69A6NI79 296 aa3.87□□□□□ -1.79
SMC4-218ENST00000486711 TMCO5BA8MYB1 307 aa3.87□□□□□ -1.79
SMC4-218ENST00000486711 KPNA7A9QM74 516 aa3.87□□□□□ -1.79
SMC4-218ENST00000486711 NPIPB9F8W1W9 429 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms