RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 ZNF569Q5MCW4 686 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 SPATA46Q5T0L3 261 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 PTRHD1Q6GMV3 140 aaKnown RBP6.49□□□□□ -1.37
HDAC3-209ENST00000486618 CRTC3Q6UUV7 619 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 IGFL3Q6UXB1 125 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 ZNF517Q6ZMY9 492 aaPredicted RBP6.49□□□□□ -1.37
HDAC3-209ENST00000486618 LINC00696Q6ZRV3 163 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 OTOAQ7RTW8 1153 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 PXKQ7Z7A4 578 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 AKAP14Q86UN6 197 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 MCOLN2Q8IZK6 566 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 D2HGDHQ8N465 521 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 ZADH2Q8N4Q0 377 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 ENDOVQ8N8Q3 282 aaKnown RBP6.49□□□□□ -1.37
HDAC3-209ENST00000486618 ST6GALNAC3Q8NDV1 305 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 SLC24A4Q8NFF2 622 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 STT3BQ8TCJ2 826 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 CPT1BQ92523 772 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 PHF21BQ96EK2 531 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 KTI12Q96EK9 354 aaPredicted RBP6.49□□□□□ -1.37
HDAC3-209ENST00000486618 RNF125Q96EQ8 232 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 TPD52L3Q96J77 140 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 ALS2CR12Q96Q35 445 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 LYSMD1Q96S90 227 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 AGPAT1Q99943 283 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 TIMM29Q9BSF4 260 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 MLPHQ9BV36 600 aaPredicted RBP6.49□□□□□ -1.37
HDAC3-209ENST00000486618 TUBB2BQ9BVA1 445 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 SPATA16Q9BXB7 569 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 MRPL37Q9BZE1 423 aaKnown RBP6.49□□□□□ -1.37
HDAC3-209ENST00000486618 MVB12BQ9H7P6 319 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 SOHLH2Q9NX45 425 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 STX18Q9P2W9 335 aaKnown RBP6.49□□□□□ -1.37
HDAC3-209ENST00000486618 TCFL5Q9UL49 500 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 CHMP2BQ9UQN3 213 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 ERVK-19Q9WJR5 959 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 DNAJC16Q9Y2G8 782 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 MTORP42345 2549 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 CROCCQ5TZA2 2017 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 CCDC88CQ9P219 2028 aa6.49□□□□□ -1.37
HDAC3-209ENST00000486618 PCNX1Q96RV3 2341 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 KRTAP4-8A0A0G2JLE6 195 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 A0A1B0GUH1 482 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 TLCD2A6NGC4 264 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 ZSCAN5BA6NJL1 495 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 PRSS44E7EML9 344 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 LRRTM2O43300 516 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 VEGFDO43915 354 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 CDK14O94921 469 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 ZBTB11O95625 1053 aaPredicted RBP6.48□□□□□ -1.37
HDAC3-209ENST00000486618 DIRAS3O95661 229 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 PABPC4LP0CB38 370 aaKnown RBP6.48□□□□□ -1.37
HDAC3-209ENST00000486618 RALBP11234 206 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 PRF1P14222 555 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 NCF1P14598 390 aaPredicted RBP6.48□□□□□ -1.37
HDAC3-209ENST00000486618 RPL10P27635 214 aaKnown RBP6.48□□□□□ -1.37
HDAC3-209ENST00000486618 MIPP30301 263 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 POLR2GP62487 172 aaKnown RBP eCLIP6.48□□□□□ -1.37
HDAC3-209ENST00000486618 CSTF3Q12996 717 aaKnown RBP6.48□□□□□ -1.37
HDAC3-209ENST00000486618 SEC23BQ15437 767 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 TBCEQ15813 527 aaPredicted RBP6.48□□□□□ -1.37
HDAC3-209ENST00000486618 KRTAP21-3Q3LHN1 58 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 CCDC153Q494R4 210 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 ATAD3BQ5T9A4 648 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 GKAP1Q5VSY0 366 aaPredicted RBP6.48□□□□□ -1.37
HDAC3-209ENST00000486618 ARMC6Q6NXE6 501 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 CYP20A1Q6UW02 462 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 TPRA1Q86W33 373 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 CNTN4Q8IWV2 1026 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 CMIPQ8IY22 773 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 ULK2Q8IYT8 1036 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 TEX26Q8N6G2 289 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 POGLUT1Q8NBL1 392 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 CLEC1AQ8NC01 280 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 PIK3C3Q8NEB9 887 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 BBS1Q8NFJ9 593 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 NEK11Q8NG66 645 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 PSMA8Q8TAA3 256 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 SLC13A3Q8WWT9 602 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 IQCDQ96DY2 449 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 FAM71F1Q96KD3 344 aaPredicted RBP6.48□□□□□ -1.37
HDAC3-209ENST00000486618 FER1L6-AS2Q96M78 137 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 SMIM14Q96QK8 99 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 RANBP9Q96S59 729 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 PEBP4Q96S96 227 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 MAP3K3Q99759 626 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 ZSCAN5AQ9BUG6 496 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 CARD6Q9BX69 1037 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 TDRD1Q9BXT4 1180 aaKnown RBP6.48□□□□□ -1.37
HDAC3-209ENST00000486618 MRM3Q9HC36 420 aaKnown RBP6.48□□□□□ -1.37
HDAC3-209ENST00000486618 PCDH9Q9HC56 1237 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 SYTL2Q9HCH5 934 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 SEPSECSQ9HD40 501 aaKnown RBP6.48□□□□□ -1.37
HDAC3-209ENST00000486618 GPATCH2Q9NW75 528 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 MRPL15Q9P015 296 aaKnown RBP6.48□□□□□ -1.37
HDAC3-209ENST00000486618 SLC23A2Q9UGH3 650 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 DUSP13Q9UII6 198 aa6.48□□□□□ -1.37
HDAC3-209ENST00000486618 CNOT11Q9UKZ1 510 aaKnown RBP6.48□□□□□ -1.37
HDAC3-209ENST00000486618 TTC7AQ9ULT0 858 aaPredicted RBP6.48□□□□□ -1.37
HDAC3-209ENST00000486618 PADI2Q9Y2J8 665 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms