RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 ATG14Q6ZNE5 492 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 PRICKLE2Q7Z3G6 844 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 CROCCP2Q86T23 111 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 IQCKQ8N0W5 287 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 ZCCHC7Q8N3Z6 543 aaKnown RBP11.69□□□□□ -0.54
HMG20B-211ENST00000486028 ZADH2Q8N4Q0 377 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 CDYL2Q8N8U2 506 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 FAM47BQ8NA70 645 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 M1APQ8TC57 530 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 LMF1Q96S06 567 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 LPAR4Q99677 370 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 SLC29A3Q9BZD2 475 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 C12orf65Q9H3J6 166 aaKnown RBP11.69□□□□□ -0.54
HMG20B-211ENST00000486028 NECTIN3Q9NQS3 549 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 PRTFDC1Q9NRG1 225 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 OXSMQ9NWU1 459 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 NMRK1Q9NWW6 199 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 MS4A12Q9NXJ0 267 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 CNTRLQ7Z7A1 2325 aa11.69□□□□□ -0.54
HMG20B-211ENST00000486028 IGKV3D-11A0A0A0MRZ8 115 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 TCRBV16S1A1N1A0A5B0 115 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 SYNDIG1LA6NDD5 238 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 H3BQF6 201 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 RGS16O15492 202 aaPredicted RBP11.68□□□□□ -0.54
HMG20B-211ENST00000486028 CTNSO60931 367 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 SEMA3DO95025 777 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 ETHE1O95571 254 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 ENO1P06733 434 aaKnown RBP11.68□□□□□ -0.54
HMG20B-211ENST00000486028 CPN2P22792 545 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 TLX1P31314 330 aaPredicted RBP11.68□□□□□ -0.54
HMG20B-211ENST00000486028 SOX11P35716 441 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 CASRP41180 1078 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 ASPHQ12797 758 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 BTBD16Q32M84 506 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 CRB2Q5IJ48 1285 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 LIPMQ5VYY2 423 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 PAPD4Q6PIY7 484 aaKnown RBP11.68□□□□□ -0.54
HMG20B-211ENST00000486028 CYP20A1Q6UW02 462 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 IGFL3Q6UXB1 125 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 ISLR2Q6UXK2 745 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 GPR180Q86V85 440 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 SCUBE1Q8IWY4 988 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 C7orf57Q8NEG2 295 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 METTL6Q8TCB7 284 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 SELENOMQ8WWX9 145 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 MAPKAP1Q9BPZ7 522 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 WDR77Q9BQA1 342 aaPredicted RBP11.68□□□□□ -0.54
HMG20B-211ENST00000486028 SORBS1Q9BX66 1292 aaKnown RBP11.68□□□□□ -0.54
HMG20B-211ENST00000486028 ACBD3Q9H3P7 528 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 GSTO2Q9H4Y5 243 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 EPS8L2Q9H6S3 715 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 DDX31Q9H8H2 851 aaKnown RBP11.68□□□□□ -0.54
HMG20B-211ENST00000486028 BRF2Q9HAW0 419 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 SENP1Q9P0U3 644 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 PHF11Q9UIL8 331 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 ZNF225Q9UK10 706 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 FBXW2Q9UKT8 454 aa11.68□□□□□ -0.54
HMG20B-211ENST00000486028 FASNP49327 2511 aaKnown RBP11.67□□□□□ -0.54
HMG20B-211ENST00000486028 MANBAO00462 879 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 SLC28A2O43868 658 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 ULK1O75385 1050 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 SPAG7O75391 227 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 EEDO75530 441 aaKnown RBP11.67□□□□□ -0.54
HMG20B-211ENST00000486028 ESRRBO95718 433 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 PDYNP01213 254 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 FAM58BPP0C7Q3 252 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 HMOX2P30519 316 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 BSGP35613 385 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 HNRNPFP52597 415 aaKnown RBP11.67□□□□□ -0.54
HMG20B-211ENST00000486028 ZNF33BQ06732 778 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 STX4Q12846 297 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 MFAP5Q13361 173 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 ZSCAN26Q16670 478 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 CEP85LQ5SZL2 805 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 FRMD7Q6ZUT3 714 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 PAGE2Q7Z2X7 111 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 C10orf107Q8IVU9 208 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 RBMXL3Q8N7X1 1067 aaKnown RBP11.67□□□□□ -0.54
HMG20B-211ENST00000486028 TMEM52Q8NDY8 209 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 BRIX1Q8TDN6 353 aaKnown RBP11.67□□□□□ -0.54
HMG20B-211ENST00000486028 PSMF1Q92530 271 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 TANKQ92844 425 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 CSF3RQ99062 836 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 CENPHQ9H3R5 247 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 MMP25Q9NPA2 562 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 MID1IP1Q9NPA3 183 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 PNO1Q9NRX1 252 aaKnown RBP11.67□□□□□ -0.54
HMG20B-211ENST00000486028 FARSBQ9NSD9 589 aaKnown RBP11.67□□□□□ -0.54
HMG20B-211ENST00000486028 LYARQ9NX58 379 aaKnown RBP11.67□□□□□ -0.54
HMG20B-211ENST00000486028 PTGFRNQ9P2B2 879 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 TEKT2Q9UIF3 430 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 ADAM29Q9UKF5 820 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 ADAM21Q9UKJ8 722 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 SLC12A4Q9UP95 1085 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 SCN2AQ99250 2005 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 DOCK10Q96BY6 2186 aa11.67□□□□□ -0.54
HMG20B-211ENST00000486028 A0A0A6YYD5 115 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 ARHGAP10A1A4S6 786 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 A8MUA0 341 aa11.66□□□□□ -0.54
HMG20B-211ENST00000486028 A8MUI8 341 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms