RNA–Protein interactions for RNA: ENST00000484528.1

USP40-215, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-215ENST00000484528 ZFAND5O76080 213 aa20.05■□□□□ 0.8
USP40-215ENST00000484528 GSTA2P09210 222 aa20.05■□□□□ 0.8
USP40-215ENST00000484528 COX6B1P14854 86 aa20.05■□□□□ 0.8
USP40-215ENST00000484528 MAGEA4P43358 317 aa20.05■□□□□ 0.8
USP40-215ENST00000484528 LAPTM5Q13571 262 aa20.05■□□□□ 0.8
USP40-215ENST00000484528 HIST2H2ACQ16777 129 aaPredicted RBP20.05■□□□□ 0.8
USP40-215ENST00000484528 HIST2H2AA3Q6FI13 130 aa20.05■□□□□ 0.8
USP40-215ENST00000484528 CYS1Q717R9 158 aa20.05■□□□□ 0.8
USP40-215ENST00000484528 ZNF321PQ8N8H1 164 aa20.05■□□□□ 0.8
USP40-215ENST00000484528 POGLUT1Q8NBL1 392 aa20.05■□□□□ 0.8
USP40-215ENST00000484528 ZNF473Q8WTR7 871 aaKnown RBP20.05■□□□□ 0.8
USP40-215ENST00000484528 KCNC2Q96PR1 638 aa20.05■□□□□ 0.8
USP40-215ENST00000484528 ALOXE3Q9BYJ1 711 aa20.05■□□□□ 0.8
USP40-215ENST00000484528 OR8D2Q9GZM6 311 aa20.05■□□□□ 0.8
USP40-215ENST00000484528 YARS2Q9Y2Z4 477 aaKnown RBP20.05■□□□□ 0.8
USP40-215ENST00000484528 UTP11Q9Y3A2 253 aaKnown RBP20.05■□□□□ 0.8
USP40-215ENST00000484528 A0A1B0GTH9 108 aa20.04■□□□□ 0.8
USP40-215ENST00000484528 TMEM200CA6NKL6 621 aa20.04■□□□□ 0.8
USP40-215ENST00000484528 WWP2O00308 870 aa20.04■□□□□ 0.8
USP40-215ENST00000484528 SAP18O00422 153 aaKnown RBP20.04■□□□□ 0.8
USP40-215ENST00000484528 PRRG2O14669 202 aa20.04■□□□□ 0.8
USP40-215ENST00000484528 CTNSO60931 367 aa20.04■□□□□ 0.8
USP40-215ENST00000484528 TGFB1P01137 390 aa20.04■□□□□ 0.8
USP40-215ENST00000484528 ATP5A1P25705 553 aaKnown RBP20.04■□□□□ 0.8
USP40-215ENST00000484528 CASQ1P31415 396 aa20.04■□□□□ 0.8
USP40-215ENST00000484528 STX4Q12846 297 aa20.04■□□□□ 0.8
USP40-215ENST00000484528 DDX39BQ13838 428 aaKnown RBP20.04■□□□□ 0.8
USP40-215ENST00000484528 RCN2Q14257 317 aa20.04■□□□□ 0.8
USP40-215ENST00000484528 ZDHHC24Q6UX98 284 aa20.04■□□□□ 0.8
USP40-215ENST00000484528 TBC1D1Q86TI0 1168 aaPredicted RBP20.04■□□□□ 0.8
USP40-215ENST00000484528 ISCA2Q86U28 154 aa20.04■□□□□ 0.8
USP40-215ENST00000484528 TMEM132CQ8N3T6 1108 aa20.04■□□□□ 0.8
USP40-215ENST00000484528 RNF175Q8N4F7 328 aa20.04■□□□□ 0.8
USP40-215ENST00000484528 STAG3L4Q8TBR4 150 aa20.04■□□□□ 0.8
USP40-215ENST00000484528 PTPMT1Q8WUK0 201 aaPredicted RBP20.04■□□□□ 0.8
USP40-215ENST00000484528 MRRFQ96E11 262 aaKnown RBP20.04■□□□□ 0.8
USP40-215ENST00000484528 ATOH8Q96SQ7 321 aa20.04■□□□□ 0.8
USP40-215ENST00000484528 SORBS1Q9BX66 1292 aaKnown RBP20.04■□□□□ 0.8
USP40-215ENST00000484528 TIMMDC1Q9NPL8 285 aa20.04■□□□□ 0.8
USP40-215ENST00000484528 IGSF5Q9NSI5 407 aa20.04■□□□□ 0.8
USP40-215ENST00000484528 DEPPQ9NTK1 212 aa20.04■□□□□ 0.8
USP40-215ENST00000484528 CCDC168Q8NDH2 2452 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 A8MVJ9 347 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 ADAM10O14672 748 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 KERAO60938 352 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 OR6B1O95007 311 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 CLDN14O95500 239 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 TPOP07202 933 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 TNNI3P19429 210 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 STX2P32856 288 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 SOX3P41225 446 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 NR0B1P51843 470 aaKnown RBP20.03■□□□□ 0.8
USP40-215ENST00000484528 IRF9Q00978 393 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 TBCCQ15814 346 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 CMPK2Q5EBM0 449 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 MED27Q6P2C8 311 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 IL20RBQ6UXL0 311 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 GDF7Q7Z4P5 450 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 CD163Q86VB7 1156 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 ACOT4Q8N9L9 421 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 PSD4Q8NDX1 1056 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 KCTD4Q8WVF5 259 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 ASB15Q8WXK1 588 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 NXNL1Q96CM4 212 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 MTFMTQ96DP5 389 aaKnown RBP20.03■□□□□ 0.8
USP40-215ENST00000484528 RAB17Q9H0T7 212 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 NMRAL1Q9HBL8 299 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 LYRM4Q9HD34 91 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 HPF1Q9NWY4 346 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 OPTCQ9UBM4 332 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 PPT2Q9UMR5 302 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 PDZD2O15018 2839 aa20.03■□□□□ 0.8
USP40-215ENST00000484528 TACC2O95359 2948 aa20.02■□□□□ 0.8
USP40-215ENST00000484528 A0A0G2JMM0 328 aa20.02■□□□□ 0.8
USP40-215ENST00000484528 A0A1W2PPB8 328 aa20.02■□□□□ 0.8
USP40-215ENST00000484528 A0A1W2PRS3 328 aa20.02■□□□□ 0.8
USP40-215ENST00000484528 PINLYPA6NC86 204 aa20.02■□□□□ 0.8
USP40-215ENST00000484528 KIR3DP1A8MWS1 328 aa20.02■□□□□ 0.8
USP40-215ENST00000484528 C17orf105B2RV13 164 aa20.02■□□□□ 0.8
USP40-215ENST00000484528 G3V3Y1 287 aa20.02■□□□□ 0.8
USP40-215ENST00000484528 K7EPI3 171 aa20.02■□□□□ 0.8
USP40-215ENST00000484528 PDE9AO76083 593 aa20.02■□□□□ 0.8
USP40-215ENST00000484528 TUBB4AP04350 444 aa20.02■□□□□ 0.8
USP40-215ENST00000484528 LTA4HP09960 611 aaKnown RBP20.02■□□□□ 0.8
USP40-215ENST00000484528 AGAP20933 346 aa20.02■□□□□ 0.8
USP40-215ENST00000484528 PTGS2P35354 604 aa20.02■□□□□ 0.8
USP40-215ENST00000484528 SSR2P43308 183 aa20.02■□□□□ 0.8
USP40-215ENST00000484528 HK2P52789 917 aa20.02■□□□□ 0.8
USP40-215ENST00000484528 SYT10Q6XYQ8 523 aa20.02■□□□□ 0.8
USP40-215ENST00000484528 HSDL2Q6YN16 418 aa20.02■□□□□ 0.8
USP40-215ENST00000484528 MYLK4Q86YV6 388 aaPredicted RBP20.02■□□□□ 0.8
USP40-215ENST00000484528 ZFP62Q8NB50 900 aaPredicted RBP20.02■□□□□ 0.8
USP40-215ENST00000484528 OR7G3Q8NG95 312 aa20.02■□□□□ 0.8
USP40-215ENST00000484528 OR52N2Q8NGI0 321 aa20.02■□□□□ 0.8
USP40-215ENST00000484528 OR14A16Q8NHC5 309 aa20.02■□□□□ 0.8
USP40-215ENST00000484528 UBTD2Q8WUN7 234 aa20.02■□□□□ 0.8
USP40-215ENST00000484528 DAZLQ92904 295 aaKnown RBP20.02■□□□□ 0.8
USP40-215ENST00000484528 RASL10BQ96S79 203 aa20.02■□□□□ 0.8
USP40-215ENST00000484528 DMRTA2Q96SC8 542 aa20.02■□□□□ 0.8
USP40-215ENST00000484528 TBCDQ9BTW9 1192 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms