RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 SLC6A12P48065 614 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 SLC6A9P48067 706 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 RAB28P51157 221 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 METAP1P53582 386 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 CTSCP53634 463 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 SESN3P58005 492 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 ABATP80404 500 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 SEMG2Q02383 582 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 SIGLEC14Q08ET2 396 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 BNIP1Q12981 228 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 CSTF3Q12996 717 aaKnown RBP4.12□□□□□ -1.75
SPTA1-206ENST00000484520 FHL1Q13642 323 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 KRT33BQ14525 404 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 KIR2DS5Q14953 304 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 ELOCQ15369 112 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 HIST2H2ACQ16777 129 aaPredicted RBP4.12□□□□□ -1.75
SPTA1-206ENST00000484520 UAP1L1Q3KQV9 507 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 CD300EQ496F6 205 aaPredicted RBP4.12□□□□□ -1.75
SPTA1-206ENST00000484520 KHDC1Q4VXA5 237 aaKnown RBP4.12□□□□□ -1.75
SPTA1-206ENST00000484520 PYCR3Q53H96 274 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 UNC50Q53HI1 259 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 COQ5Q5HYK3 327 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 HIST2H2AA3Q6FI13 130 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 CAPRIN2Q6IMN6 1127 aaKnown RBP4.12□□□□□ -1.75
SPTA1-206ENST00000484520 CGB2Q6NT52 195 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 KLHL35Q6PF15 583 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 NAPRTQ6XQN6 538 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 GOLGA7Q7Z5G4 137 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 PARGQ86W56 976 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 ZNF547Q8IVP9 402 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 KRT78Q8N1N4 520 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 SPATA6LQ8N4H0 392 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 CPSF7Q8N684 471 aaKnown RBP4.12□□□□□ -1.75
SPTA1-206ENST00000484520 TEX9Q8N6V9 391 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 L3MBTL4Q8NA19 623 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 OR9A1PQ8NGU1 263 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 OR56A3Q8NH54 315 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 LKAAEAR1Q8TD35 194 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 TRPC4APQ8TEL6 797 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 TWIST2Q8WVJ9 160 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 SMPDL3AQ92484 453 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 TFGQ92734 400 aaPredicted RBP4.12□□□□□ -1.75
SPTA1-206ENST00000484520 USP7Q93009 1102 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 POP5Q969H6 163 aaKnown RBP4.12□□□□□ -1.75
SPTA1-206ENST00000484520 FAM136AQ96C01 138 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 ERP27Q96DN0 273 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 WDR34Q96EX3 536 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 CENPKQ9BS16 269 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 EFCAB11Q9BUY7 163 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 SHCBP1LQ9BZQ2 653 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 C1orf21Q9H246 121 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 OR52A5Q9H2C5 316 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 ELOVL6Q9H5J4 265 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 KIR3DX1Q9H7L2 352 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 ACTR8Q9H981 624 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 BRF2Q9HAW0 419 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 CCDC177Q9NQR7 707 aaPredicted RBP4.12□□□□□ -1.75
SPTA1-206ENST00000484520 POT1Q9NUX5 634 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 WSB2Q9NYS7 404 aaPredicted RBP4.12□□□□□ -1.75
SPTA1-206ENST00000484520 OR6C2Q9NZP2 312 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 HEY2Q9UBP5 337 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 MARCOQ9UEW3 520 aaPredicted RBP4.12□□□□□ -1.75
SPTA1-206ENST00000484520 BCAP29Q9UHQ4 241 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 SLC12A4Q9UP95 1085 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 PDE10AQ9Y233 779 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 ASF1AQ9Y294 204 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 AP3M1Q9Y2T2 418 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 WBP11Q9Y2W2 641 aaKnown RBP4.12□□□□□ -1.75
SPTA1-206ENST00000484520 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.12□□□□□ -1.75
SPTA1-206ENST00000484520 OR1A2Q9Y585 309 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 CAPN7Q9Y6W3 813 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 BDP1A6H8Y1 2624 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 SHROOM3Q8TF72 1996 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 NUP205Q92621 2012 aa4.12□□□□□ -1.75
SPTA1-206ENST00000484520 ZNF106Q9H2Y7 1883 aaKnown RBP4.11□□□□□ -1.75
SPTA1-206ENST00000484520 IGHV1OR15-9A0A0B4J2B8 117 aa4.11□□□□□ -1.75
SPTA1-206ENST00000484520 A0A0U1RQS6 177 aa4.11□□□□□ -1.75
SPTA1-206ENST00000484520 SPTY2D1-AS1A0A0U1RR47 76 aa4.11□□□□□ -1.75
SPTA1-206ENST00000484520 PRR23AA6NEV1 266 aa4.11□□□□□ -1.75
SPTA1-206ENST00000484520 NEMP2A6NFY4 417 aa4.11□□□□□ -1.75
SPTA1-206ENST00000484520 ERICH4A6NGS2 130 aa4.11□□□□□ -1.75
SPTA1-206ENST00000484520 NCF1BA6NI72 391 aaPredicted RBP4.11□□□□□ -1.75
SPTA1-206ENST00000484520 SHISA7A6NL88 538 aa4.11□□□□□ -1.75
SPTA1-206ENST00000484520 PDZK1P1A8MUH7 402 aa4.11□□□□□ -1.75
SPTA1-206ENST00000484520 NCF1CA8MVU1 366 aaPredicted RBP4.11□□□□□ -1.75
SPTA1-206ENST00000484520 ARHGEF33A8MVX0 844 aa4.11□□□□□ -1.75
SPTA1-206ENST00000484520 MEI4A8MW99 385 aa4.11□□□□□ -1.75
SPTA1-206ENST00000484520 H0YIV9 168 aa4.11□□□□□ -1.75
SPTA1-206ENST00000484520 FOXE1O00358 373 aaPredicted RBP4.11□□□□□ -1.75
SPTA1-206ENST00000484520 PLK4O00444 970 aa4.11□□□□□ -1.75
SPTA1-206ENST00000484520 FCHO1O14526 889 aa4.11□□□□□ -1.75
SPTA1-206ENST00000484520 ZNF195O14628 629 aa4.11□□□□□ -1.75
SPTA1-206ENST00000484520 UBDO15205 165 aa4.11□□□□□ -1.75
SPTA1-206ENST00000484520 SLC31A1O15431 190 aa4.11□□□□□ -1.75
SPTA1-206ENST00000484520 ITM2AO43736 263 aa4.11□□□□□ -1.75
SPTA1-206ENST00000484520 DFNA5O60443 496 aa4.11□□□□□ -1.75
SPTA1-206ENST00000484520 LYPLA1O75608 230 aaPredicted RBP4.11□□□□□ -1.75
SPTA1-206ENST00000484520 RSL1D1O76021 490 aaKnown RBP4.11□□□□□ -1.75
SPTA1-206ENST00000484520 SIX3O95343 332 aaPredicted RBP4.11□□□□□ -1.75
SPTA1-206ENST00000484520 GUCA1CO95843 209 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms