RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 MAPRE3Q9UPY8 281 aa8.4□□□□□ -1.07
CDC42SE1-204ENST00000483763 ATG4BQ9Y4P1 393 aa8.4□□□□□ -1.07
CDC42SE1-204ENST00000483763 SNX8Q9Y5X2 465 aa8.4□□□□□ -1.07
CDC42SE1-204ENST00000483763 DMXL1Q9Y485 3027 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 SCN3AQ9NY46 2000 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 CACNA1HO95180 2353 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 A0A1W2PR48 441 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 DNAJB6O75190 326 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 DIRAS1O95057 198 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 SNAP29O95721 258 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 TNFP01375 233 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 LINGO3P0C6S8 592 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 PVRP15151 417 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 UGT2B7P16662 529 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 HIST1H1TP22492 207 aaPredicted RBP8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 PRKACGP22612 351 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 CMPK1P30085 196 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 SERPINB1P30740 379 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 GRK3P35626 688 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 AHRP35869 848 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 SSR2P43308 183 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 VLDLRP98155 873 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 HSPB3Q12988 150 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 SLAMF1Q13291 335 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 HEPACAMQ14CZ8 416 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 C4orf46Q504U0 113 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 C18orf63Q68DL7 685 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 PAGE2Q7Z2X7 111 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 ACOT4Q8N9L9 421 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 MFSD2AQ8NA29 543 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 NELL2Q99435 816 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 PHOX2BQ99453 314 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 YIPF2Q9BWQ6 316 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 OSBPL11Q9BXB4 747 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 SIRT3Q9NTG7 399 aaPredicted RBP8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 TMEM74BQ9NUR3 256 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 OLAHQ9NV23 265 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 SCOCQ9UIL1 159 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 FAF1Q9UNN5 650 aaPredicted RBP8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 ASB4Q9Y574 426 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 LOC105369274A0A096LPK9 316 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 LOC102723532A0A0G2JNH3 316 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 GSAPA4D1B5 854 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 HCRTR1O43613 425 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 DEAF1O75398 565 aaPredicted RBP8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 FAM58BPP0C7Q3 252 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 NAT2P11245 290 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 CERS1P27544 350 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 HSPA13P48723 471 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 UBE2IP63279 158 aaKnown RBP8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 TXNL4AP83876 142 aaKnown RBP8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 VAC14Q08AM6 782 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 LAPTM4AQ15012 233 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 IQCCQ4KMZ1 466 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 CYBRD1Q53TN4 286 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 RNF220Q5VTB9 566 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 FCRL6Q6DN72 434 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 TSEN54Q7Z6J9 526 aaKnown RBP8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 TAF8Q7Z7C8 310 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 OR4N4Q8N0Y3 316 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 MFSD9Q8NBP5 474 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 TTLQ8NG68 377 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 OR2L5Q8NG80 312 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 OR52N2Q8NGI0 321 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 FBXL20Q96IG2 436 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 OR2A5Q96R48 311 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 BARD1Q99728 777 aaKnown RBP8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 ADI1Q9BV57 179 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 LRRC61Q9BV99 259 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 RSPO3Q9BXY4 272 aaPredicted RBP8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 ASPSCR1Q9BZE9 553 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 EPS8L2Q9H6S3 715 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 SMURF2Q9HAU4 748 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 ADAM29Q9UKF5 820 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 DMTF1Q9Y222 760 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 ZNF318Q5VUA4 2279 aa8.39□□□□□ -1.07
CDC42SE1-204ENST00000483763 A0A0J9YVX5 310 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 OR2A25A4D2G3 310 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 hCG_2039718K7EN88 272 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 P2RX6O15547 441 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 VIPP01282 170 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 OPN1SWP03999 348 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 SEMG1P04279 462 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 ALPLP05186 524 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 IL1RNP18510 177 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 ATP5A1P25705 553 aaKnown RBP8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 SOAT1P35610 550 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 RPL3P39023 403 aaKnown RBP8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 FRKP42685 505 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 MAGEA2P43356 314 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 RPS9P46781 194 aaKnown RBP8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 CDK9P50750 372 aaKnown RBP8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 ARSFP54793 590 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 MANFP55145 182 aaKnown RBP8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 EEF1A2Q05639 463 aaKnown RBP8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 DUSP2Q05923 314 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 MERTKQ12866 999 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 VEZF1Q14119 521 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 TMEM35AQ53FP2 167 aa8.38□□□□□ -1.07
CDC42SE1-204ENST00000483763 TOR1AIP1Q5JTV8 583 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms