RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 ANKRD10Q9NXR5 420 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 PSD3Q9NYI0 1048 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 PHF11Q9UIL8 331 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 PPIEQ9UNP9 301 aaKnown RBP11.11□□□□□ -0.63
HMGN1-213ENST00000482192 PCDHGB6Q9Y5F9 930 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 TRBV11-1A0A0K0K1C0 115 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 A8MT66 165 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 FOXE1O00358 373 aaPredicted RBP11.1□□□□□ -0.63
HMGN1-213ENST00000482192 PLPP1O14494 284 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 FCHO1O14526 889 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 OTCP00480 354 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 CRYABP02511 175 aaKnown RBP11.1□□□□□ -0.63
HMGN1-213ENST00000482192 IFNA16P05015 189 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 RPS17P08708 135 aaKnown RBP11.1□□□□□ -0.63
HMGN1-213ENST00000482192 SBK3P0C264 359 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 TAC1P20366 129 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 CPN2P22792 545 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 TNFRSF8P28908 595 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 TPP2P29144 1249 aaPredicted RBP11.1□□□□□ -0.63
HMGN1-213ENST00000482192 PPP2R1BP30154 601 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 MLF1P58340 268 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 OC90Q02509 493 aaPredicted RBP11.1□□□□□ -0.63
HMGN1-213ENST00000482192 TRAF3Q13114 568 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 SLAMF1Q13291 335 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 SERTAD2Q14140 314 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 GGTA1PQ4G0N0 100 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 ZNF766Q5HY98 468 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 FRG2Q64ET8 278 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 ARMC10Q8N2F6 343 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 TMEM132CQ8N3T6 1108 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 TMEM151AQ8N4L1 468 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 APCDD1LQ8NCL9 501 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 MDS2Q8NDY4 140 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 WDR20Q8TBZ3 569 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 ACMSDQ8TDX5 336 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.1□□□□□ -0.63
HMGN1-213ENST00000482192 C5orf34Q96MH7 638 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 NSUN5Q96P11 429 aaKnown RBP11.1□□□□□ -0.63
HMGN1-213ENST00000482192 FRG2BQ96QU4 278 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 TAAR6Q96RI8 345 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 SORBS1Q9BX66 1292 aaKnown RBP11.1□□□□□ -0.63
HMGN1-213ENST00000482192 C1QTNF3Q9BXJ4 246 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 ZBTB26Q9HCK0 441 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 SEMA4BQ9NPR2 832 aaPredicted RBP11.1□□□□□ -0.63
HMGN1-213ENST00000482192 VTI1BQ9UEU0 232 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 FBXW2Q9UKT8 454 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 PPT2Q9UMR5 302 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 CLCA3PQ9Y6N3 262 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 DOCK10Q96BY6 2186 aa11.1□□□□□ -0.63
HMGN1-213ENST00000482192 LDB3O75112 727 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 SEMA7AO75326 666 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 SEMA3DO95025 777 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 GSTA1P08263 222 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 CD46P15529 392 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 TLX1P31314 330 aaPredicted RBP11.09□□□□□ -0.63
HMGN1-213ENST00000482192 TRHRP34981 398 aaPredicted RBP11.09□□□□□ -0.63
HMGN1-213ENST00000482192 CYB561P49447 251 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 NEK2P51955 445 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 HERVK_113P63132 956 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 TNFRSF17Q02223 184 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 ZNF324BQ6AW86 544 aaPredicted RBP11.09□□□□□ -0.63
HMGN1-213ENST00000482192 TTC19Q6DKK2 380 aaPredicted RBP11.09□□□□□ -0.63
HMGN1-213ENST00000482192 SPINK14Q6IE38 97 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 GPR180Q86V85 440 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 NUDT13Q86X67 352 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 TMEM178AQ8NBL3 297 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 MORN4Q8NDC4 146 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 OR4F6Q8NGB9 312 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 OR14A16Q8NHC5 309 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 DNAJB8Q8NHS0 232 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 ZNF483Q8TF39 744 aaPredicted RBP11.09□□□□□ -0.63
HMGN1-213ENST00000482192 SSC4DQ8WTU2 575 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 UBLCP1Q8WVY7 318 aaPredicted RBP11.09□□□□□ -0.63
HMGN1-213ENST00000482192 NR4A3Q92570 626 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 DAZLQ92904 295 aaKnown RBP11.09□□□□□ -0.63
HMGN1-213ENST00000482192 NCLNQ969V3 563 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 SCMH1Q96GD3 660 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 SIGLEC12Q96PQ1 595 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 SERPINI1Q99574 410 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 ERVK-6Q9BXR3 956 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 ZNF717Q9BY31 904 aaPredicted RBP11.09□□□□□ -0.63
HMGN1-213ENST00000482192 ALOXE3Q9BYJ1 711 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 ELOVL6Q9H5J4 265 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 RPF2Q9H7B2 306 aaKnown RBP11.09□□□□□ -0.63
HMGN1-213ENST00000482192 DDX31Q9H8H2 851 aaKnown RBP11.09□□□□□ -0.63
HMGN1-213ENST00000482192 PPCSQ9HAB8 311 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 LYARQ9NX58 379 aaKnown RBP11.09□□□□□ -0.63
HMGN1-213ENST00000482192 TMEM216Q9P0N5 145 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 LRFN1Q9P244 771 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 TBK1Q9UHD2 729 aa11.09□□□□□ -0.63
HMGN1-213ENST00000482192 SPENQ96T58 3664 aaKnown RBP11.08□□□□□ -0.63
HMGN1-213ENST00000482192 A0A0A6YYD5 115 aa11.08□□□□□ -0.64
HMGN1-213ENST00000482192 GOLGA8RI6L899 631 aa11.08□□□□□ -0.64
HMGN1-213ENST00000482192 NEURL1O76050 574 aa11.08□□□□□ -0.64
HMGN1-213ENST00000482192 ETHE1O95571 254 aa11.08□□□□□ -0.64
HMGN1-213ENST00000482192 PYGBP11216 843 aa11.08□□□□□ -0.64
HMGN1-213ENST00000482192 COX7A2P14406 83 aa11.08□□□□□ -0.64
HMGN1-213ENST00000482192 TNNI3P19429 210 aa11.08□□□□□ -0.64
HMGN1-213ENST00000482192 BSGP35613 385 aa11.08□□□□□ -0.64
HMGN1-213ENST00000482192 BUD31P41223 144 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms