RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 NMRAL1Q9HBL8 299 aa17.27■□□□□ 0.36
CLK1-211ENST00000481641 KLF13Q9Y2Y9 288 aaPredicted RBP17.27■□□□□ 0.36
CLK1-211ENST00000481641 MEMO1Q9Y316 297 aa17.27■□□□□ 0.36
CLK1-211ENST00000481641 CSMD1Q96PZ7 3565 aa17.27■□□□□ 0.35
CLK1-211ENST00000481641 WWP2O00308 870 aa17.26■□□□□ 0.35
CLK1-211ENST00000481641 KERAO60938 352 aa17.26■□□□□ 0.35
CLK1-211ENST00000481641 OR2J2O76002 312 aa17.26■□□□□ 0.35
CLK1-211ENST00000481641 ZFAND5O76080 213 aa17.26■□□□□ 0.35
CLK1-211ENST00000481641 LTA4HP09960 611 aaKnown RBP17.26■□□□□ 0.35
CLK1-211ENST00000481641 ATP5A1P25705 553 aaKnown RBP17.26■□□□□ 0.35
CLK1-211ENST00000481641 TNFRSF8P28908 595 aa17.26■□□□□ 0.35
CLK1-211ENST00000481641 CRABP2P29373 138 aa17.26■□□□□ 0.35
CLK1-211ENST00000481641 HPDP32754 393 aaPredicted RBP17.26■□□□□ 0.35
CLK1-211ENST00000481641 STX2P32856 288 aa17.26■□□□□ 0.35
CLK1-211ENST00000481641 CASP2P42575 452 aa17.26■□□□□ 0.35
CLK1-211ENST00000481641 SSR4P51571 173 aa17.26■□□□□ 0.35
CLK1-211ENST00000481641 NR0B1P51843 470 aaKnown RBP17.26■□□□□ 0.35
CLK1-211ENST00000481641 ETF1P62495 437 aaKnown RBP17.26■□□□□ 0.35
CLK1-211ENST00000481641 GUCY2DQ02846 1103 aa17.26■□□□□ 0.35
CLK1-211ENST00000481641 TGM3Q08188 693 aa17.26■□□□□ 0.35
CLK1-211ENST00000481641 ELAVL1Q15717 326 aaKnown RBP17.26■□□□□ 0.35
CLK1-211ENST00000481641 ZNF630Q2M218 657 aaPredicted RBP17.26■□□□□ 0.35
CLK1-211ENST00000481641 UBAP2Q5T6F2 1119 aaKnown RBP17.26■□□□□ 0.35
CLK1-211ENST00000481641 TBC1D1Q86TI0 1168 aaPredicted RBP17.26■□□□□ 0.35
CLK1-211ENST00000481641 DOLPP1Q86YN1 238 aa17.26■□□□□ 0.35
CLK1-211ENST00000481641 TMEM132CQ8N3T6 1108 aa17.26■□□□□ 0.35
CLK1-211ENST00000481641 ACOT4Q8N9L9 421 aa17.26■□□□□ 0.35
CLK1-211ENST00000481641 AGAP11Q8TF27 550 aa17.26■□□□□ 0.35
CLK1-211ENST00000481641 KCNC2Q96PR1 638 aa17.26■□□□□ 0.35
CLK1-211ENST00000481641 PHACTR1Q9C0D0 580 aa17.26■□□□□ 0.35
CLK1-211ENST00000481641 OR51B5Q9H339 312 aa17.26■□□□□ 0.35
CLK1-211ENST00000481641 OPTCQ9UBM4 332 aa17.26■□□□□ 0.35
CLK1-211ENST00000481641 CLCA3PQ9Y6N3 262 aa17.26■□□□□ 0.35
CLK1-211ENST00000481641 LRRC14BA6NHZ5 514 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 KLRC4-KLRK1H3BQV0 150 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 C19orf84I3L1E1 186 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 K7EPI3 171 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 TFECO14948 347 aaPredicted RBP17.25■□□□□ 0.35
CLK1-211ENST00000481641 HS6ST1O60243 411 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 CDC40O60508 579 aaKnown RBP eCLIP17.25■□□□□ 0.35
CLK1-211ENST00000481641 MTHFD2P13995 350 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 TNNI3P19429 210 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 STX4Q12846 297 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 DDX39BQ13838 428 aaKnown RBP17.25■□□□□ 0.35
CLK1-211ENST00000481641 E2F2Q14209 437 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 MROH9Q5TGP6 573 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 MED27Q6P2C8 311 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 XKRXQ6PP77 449 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 IL20RBQ6UXL0 311 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 OR4N5Q8IXE1 308 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 LAS2Q8IYD9 372 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 CENPLQ8N0S6 344 aaPredicted RBP17.25■□□□□ 0.35
CLK1-211ENST00000481641 TEX9Q8N6V9 391 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 OR7G3Q8NG95 312 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 UBTD2Q8WUN7 234 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 TBCDQ9BTW9 1192 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 OR8D2Q9GZM6 311 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 LYRM4Q9HD34 91 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 DEPPQ9NTK1 212 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 VTI1BQ9UEU0 232 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 ERVK-11Q9UQG0 969 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 YARS2Q9Y2Z4 477 aaKnown RBP17.25■□□□□ 0.35
CLK1-211ENST00000481641 EML6Q6ZMW3 1958 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 FBN2P35556 2912 aa17.25■□□□□ 0.35
CLK1-211ENST00000481641 CACNA1CQ13936 2221 aa17.24■□□□□ 0.35
CLK1-211ENST00000481641 A0A1B0GTH9 108 aa17.24■□□□□ 0.35
CLK1-211ENST00000481641 HMX2A2RU54 273 aa17.24■□□□□ 0.35
CLK1-211ENST00000481641 PINLYPA6NC86 204 aa17.24■□□□□ 0.35
CLK1-211ENST00000481641 ADAM10O14672 748 aa17.24■□□□□ 0.35
CLK1-211ENST00000481641 PDE9AO76083 593 aa17.24■□□□□ 0.35
CLK1-211ENST00000481641 OR6B1O95007 311 aa17.24■□□□□ 0.35
CLK1-211ENST00000481641 SOX3P41225 446 aa17.24■□□□□ 0.35
CLK1-211ENST00000481641 SMSP52788 366 aa17.24■□□□□ 0.35
CLK1-211ENST00000481641 RCN2Q14257 317 aa17.24■□□□□ 0.35
CLK1-211ENST00000481641 AP5B1Q2VPB7 878 aa17.24■□□□□ 0.35
CLK1-211ENST00000481641 POGLUT1Q8NBL1 392 aa17.24■□□□□ 0.35
CLK1-211ENST00000481641 OR52N2Q8NGI0 321 aa17.24■□□□□ 0.35
CLK1-211ENST00000481641 ASB15Q8WXK1 588 aa17.24■□□□□ 0.35
CLK1-211ENST00000481641 ANKRD9Q96BM1 317 aaPredicted RBP17.24■□□□□ 0.35
CLK1-211ENST00000481641 ROGDIQ9GZN7 287 aa17.24■□□□□ 0.35
CLK1-211ENST00000481641 MYOTQ9UBF9 498 aa17.24■□□□□ 0.35
CLK1-211ENST00000481641 ACOT9Q9Y305 439 aa17.24■□□□□ 0.35
CLK1-211ENST00000481641 ZNF407Q9C0G0 2248 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 A0A0G2JMM0 328 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 A0A1W2PPB8 328 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 A0A1W2PRS3 328 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 A8MVJ9 347 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 KIR3DP1A8MWS1 328 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 C17orf105B2RV13 164 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 G3V3Y1 287 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 ZNF354AO60765 605 aaPredicted RBP17.23■□□□□ 0.35
CLK1-211ENST00000481641 ETHE1O95571 254 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 C2P06681 752 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 HIST1H1TP22492 207 aaPredicted RBP17.23■□□□□ 0.35
CLK1-211ENST00000481641 CPN2P22792 545 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 SSR2P43308 183 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 HK2P52789 917 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 NAB1Q13506 487 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 NAA30Q147X3 362 aaPredicted RBP17.23■□□□□ 0.35
CLK1-211ENST00000481641 UAP1Q16222 522 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms