RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 GPR143P51810 404 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 DEFB103AP81534 67 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 HSF2Q03933 536 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 MERTKQ12866 999 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 KIR2DS3Q14952 304 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 CRTC1Q6UUV9 634 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 DPPA4Q7L190 304 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 SPERTQ8NA61 448 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 C1orf216Q8TAB5 229 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 ZDHHC1Q8WTX9 485 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 BHLHE41Q9C0J9 482 aaPredicted RBP9.1□□□□□ -0.95
GARNL3-216ENST00000481242 IL17CQ9P0M4 197 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 SEC14L4Q9UDX3 406 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 PCDHGA10Q9Y5H3 936 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 HCFC2Q9Y5Z7 792 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 MYH11P35749 1972 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 A0A0X1KG70 313 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 ACOT7O00154 380 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 IGHEP01854 428 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 APOC1P02654 83 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 HK1P19367 917 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 HOXA9P31269 272 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 RORAP35398 523 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 OR3A3P47888 321 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 OR3A2P47893 321 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 SLC6A9P48067 706 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 AQP4P55087 323 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 NTHL1P78549 312 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 NIPAL4Q0D2K0 466 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 PLCXD2Q0VAA5 305 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 COQ5Q5HYK3 327 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 MARCH8Q5T0T0 291 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 CST9Q5W186 159 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 VN1R2Q8NFZ6 395 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 ALPK1Q96QP1 1244 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 GFM1Q96RP9 751 aaKnown RBP9.1□□□□□ -0.95
GARNL3-216ENST00000481242 OR2B2Q9GZK3 357 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 CST11Q9H112 138 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 XKR8Q9H6D3 395 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 SEC61A2Q9H9S3 476 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 CTPS2Q9NRF8 586 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 OBP2AQ9NY56 170 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 GRHPRQ9UBQ7 328 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 USP3Q9Y6I4 520 aa9.1□□□□□ -0.95
GARNL3-216ENST00000481242 METTL21EPA6NDL7 271 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 EFCAB9A8MZ26 197 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 PLOD3O60568 738 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 CSTAP01040 98 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 ZNF84P51523 738 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 GANABQ14697 944 aaKnown RBP9.09□□□□□ -0.95
GARNL3-216ENST00000481242 MFSD13AQ14CX5 517 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 SLC36A3Q495N2 470 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 DEFB134Q4QY38 66 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 TPRG1LQ5T0D9 272 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 LYSMD4Q5XG99 296 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 KCTD18Q6PI47 426 aaPredicted RBP9.09□□□□□ -0.95
GARNL3-216ENST00000481242 SLC2A7Q6PXP3 512 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 CCDC36Q8IYA8 594 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 GOLM1Q8NBJ4 401 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 GPR150Q8NGU9 434 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 MED30Q96HR3 178 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 ADAD1Q96M93 576 aaKnown RBP9.09□□□□□ -0.95
GARNL3-216ENST00000481242 CLSTN3Q9BQT9 956 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 NAA11Q9BSU3 229 aaPredicted RBP9.09□□□□□ -0.95
GARNL3-216ENST00000481242 PLAGL1Q9UM63 463 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 OR1I1O60431 355 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 PSIP1O75475 530 aaKnown RBP9.09□□□□□ -0.95
GARNL3-216ENST00000481242 RFPL1O75677 317 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 CER1O95813 267 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 HLA-DPB1P04440 258 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 GDI2P50395 445 aaKnown RBP9.09□□□□□ -0.95
GARNL3-216ENST00000481242 MEF2AQ02078 507 aaPredicted RBP9.09□□□□□ -0.95
GARNL3-216ENST00000481242 SLAMF1Q13291 335 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 DOC2AQ14183 400 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 ZNF234Q14588 700 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 PTPRCAPQ14761 206 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 CYBRD1Q53TN4 286 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 PSAPL1Q6NUJ1 521 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 CANT1Q8WVQ1 401 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 ZFYVE21Q9BQ24 234 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 RPF2Q9H7B2 306 aaKnown RBP9.09□□□□□ -0.95
GARNL3-216ENST00000481242 COQ10BQ9H8M1 238 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 ZNF304Q9HCX3 659 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 PSAT1Q9Y617 370 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 TMEM14AQ9Y6G1 99 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 H3BUI4 141 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 EI24O14681 340 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 FANCGO15287 622 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 CRYZL1O95825 349 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 CSTBP04080 98 aaKnown RBP9.09□□□□□ -0.95
GARNL3-216ENST00000481242 PRKACAP17612 351 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 HNRNPFP52597 415 aaKnown RBP9.09□□□□□ -0.95
GARNL3-216ENST00000481242 E2F2Q14209 437 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 CEP97Q8IW35 865 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 UBE2J2Q8N2K1 259 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 OR2L5Q8NG80 312 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 SORCS1Q8WY21 1168 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 FTSJ1Q9UET6 329 aa9.09□□□□□ -0.95
GARNL3-216ENST00000481242 MAP1BP46821 2468 aaKnown RBP9.09□□□□□ -0.95
GARNL3-216ENST00000481242 PRRC2BQ5JSZ5 2229 aaKnown RBP9.09□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms