RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 H2AFJQ9BTM1 129 aa20.33■□□□□ 0.84
SDF4-206ENST00000478938 DUSP16Q9BY84 665 aa20.33■□□□□ 0.84
SDF4-206ENST00000478938 SLC19A3Q9BZV2 496 aa20.33■□□□□ 0.84
SDF4-206ENST00000478938 C11orf16Q9NQ32 467 aa20.33■□□□□ 0.84
SDF4-206ENST00000478938 PCOLCE2Q9UKZ9 415 aa20.33■□□□□ 0.84
SDF4-206ENST00000478938 NEU3Q9UQ49 428 aa20.33■□□□□ 0.84
SDF4-206ENST00000478938 RAI2Q9Y5P3 530 aa20.33■□□□□ 0.84
SDF4-206ENST00000478938 LOC285095A0A1B0GVY8 99 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 G3V3Q6 166 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 GPR171O14626 319 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 RGS14O43566 566 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 SIGLEC6O43699 453 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 HOXB8P17481 243 aaPredicted RBP20.32■□□□□ 0.84
SDF4-206ENST00000478938 BTCP35070 178 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 SPIBQ01892 262 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 MLLT11Q13015 90 aaPredicted RBP20.32■□□□□ 0.84
SDF4-206ENST00000478938 EFCAB12Q6NXP0 572 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 BCDIN3DQ7Z5W3 292 aaKnown RBP20.32■□□□□ 0.84
SDF4-206ENST00000478938 BVESQ8NE79 360 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 EEF1AKMT1Q8WVE0 214 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 C1GALT1C1Q96EU7 318 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 ABCG5Q9H222 651 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 AGO3Q9H9G7 860 aaKnown RBP20.32■□□□□ 0.84
SDF4-206ENST00000478938 HCN2Q9UL51 889 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 SELENOFO60613 162 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 OLFM2O95897 454 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 VTNP04004 478 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 HNMTP50135 292 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 C3P1Q6ZMU1 363 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 FAM151AQ8WW52 585 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 ERMAPQ96PL5 475 aaPredicted RBP20.32■□□□□ 0.84
SDF4-206ENST00000478938 NFKBIZQ9BYH8 718 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 LRTM1Q9HBL6 345 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 MLXQ9UH92 298 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 PFDN2Q9UHV9 154 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 PLCL2Q9UPR0 1127 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 DLGAP4Q9Y2H0 992 aa20.32■□□□□ 0.84
SDF4-206ENST00000478938 FGF2P09038 288 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 PIPP12273 146 aaPredicted RBP20.31■□□□□ 0.84
SDF4-206ENST00000478938 ANXA8P13928 327 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 JUPP14923 745 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 FEN1P39748 380 aaKnown RBP20.31■□□□□ 0.84
SDF4-206ENST00000478938 GTF2H2Q13888 395 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 GTF2H2CQ6P1K8 395 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 HTR3DQ70Z44 454 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 GPRIN1Q7Z2K8 1008 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 NANOGP1Q8N7R0 232 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 LINGO1Q96FE5 620 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 TSSK3Q96PN8 268 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 FAM193BQ96PV7 902 aaPredicted RBP20.31■□□□□ 0.84
SDF4-206ENST00000478938 IPPKQ9H8X2 491 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 NDUFAF4Q9P032 175 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 PPT2Q9UMR5 302 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 EDARQ9UNE0 448 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 MEIKINA0A087WXM9 373 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 CLIC1O00299 241 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 PRRG1O14668 218 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 ADAMDEC1O15204 470 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 SULT1B1O43704 296 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 NUDT7P0C024 238 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 USP17L7P0C7H9 530 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 CLDN8P56748 225 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 USP30Q70CQ3 517 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 WDR53Q7Z5U6 358 aaPredicted RBP20.31■□□□□ 0.84
SDF4-206ENST00000478938 LAS2Q8IYD9 372 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 SCRN2Q96FV2 425 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 KLHL5Q96PQ7 755 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 SLC25A51Q9H1U9 297 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 SLC25A19Q9HC21 320 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 MPP6Q9NZW5 540 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 GPR160Q9UJ42 338 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 GJD2Q9UKL4 321 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 POMT2Q9UKY4 750 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 GINS2Q9Y248 185 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 SLC9A8Q9Y2E8 581 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 SPIN1Q9Y657 262 aaPredicted RBP20.31■□□□□ 0.84
SDF4-206ENST00000478938 RNF215Q9Y6U7 377 aa20.31■□□□□ 0.84
SDF4-206ENST00000478938 EVPLQ92817 2033 aa20.3■□□□□ 0.84
SDF4-206ENST00000478938 DOCK1Q14185 1865 aa20.3■□□□□ 0.84
SDF4-206ENST00000478938 TEX13CA0A0J9YWL9 993 aa20.3■□□□□ 0.84
SDF4-206ENST00000478938 KDM4BO94953 1096 aa20.3■□□□□ 0.84
SDF4-206ENST00000478938 TFPIP10646 304 aa20.3■□□□□ 0.84
SDF4-206ENST00000478938 OR1E2P47887 323 aa20.3■□□□□ 0.84
SDF4-206ENST00000478938 ARHGDIBP52566 201 aa20.3■□□□□ 0.84
SDF4-206ENST00000478938 ACLYP53396 1101 aa20.3■□□□□ 0.84
SDF4-206ENST00000478938 CRTC2Q53ET0 693 aaPredicted RBP20.3■□□□□ 0.84
SDF4-206ENST00000478938 PABPC1L2AQ5JQF8 200 aa20.3■□□□□ 0.84
SDF4-206ENST00000478938 RGL4Q8IZJ4 473 aa20.3■□□□□ 0.84
SDF4-206ENST00000478938 ATF6BQ99941 703 aa20.3■□□□□ 0.84
SDF4-206ENST00000478938 CD93Q9NPY3 652 aa20.3■□□□□ 0.84
SDF4-206ENST00000478938 NYNRINQ9P2P1 1898 aaKnown RBP20.3■□□□□ 0.84
SDF4-206ENST00000478938 CASKO14936 926 aa20.3■□□□□ 0.84
SDF4-206ENST00000478938 BPIP17213 487 aa20.3■□□□□ 0.84
SDF4-206ENST00000478938 WARSP23381 471 aaKnown RBP20.3■□□□□ 0.84
SDF4-206ENST00000478938 MAD2L1Q13257 205 aaPredicted RBP20.3■□□□□ 0.84
SDF4-206ENST00000478938 ARHGAP15Q53QZ3 475 aa20.3■□□□□ 0.84
SDF4-206ENST00000478938 ALKAL2Q6UX46 152 aa20.3■□□□□ 0.84
SDF4-206ENST00000478938 CLEC20AQ6ZU45 233 aa20.3■□□□□ 0.84
SDF4-206ENST00000478938 OR4C15Q8NGM1 316 aa20.3■□□□□ 0.84
SDF4-206ENST00000478938 OR4L1Q8NH43 312 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms