RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 CST8O60676 142 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 NADKO95544 446 aaPredicted RBP5.25□□□□□ -1.57
USF3-202ENST00000478658 PAHP00439 452 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 ZNF136P52737 540 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 RPS23P62266 143 aaKnown RBP5.25□□□□□ -1.57
USF3-202ENST00000478658 CATR1Q13166 79 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 CDK5R2Q13319 367 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 CCL15Q16663 113 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 ZNF628Q5EBL2 1059 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 FBXO31Q5XUX0 539 aaPredicted RBP5.25□□□□□ -1.57
USF3-202ENST00000478658 DRICH1Q6PGQ1 229 aaPredicted RBP5.25□□□□□ -1.57
USF3-202ENST00000478658 DOK6Q6PKX4 331 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 SLC22A16Q86VW1 577 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 UEVLDQ8IX04 471 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 SHKBP1Q8TBC3 707 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 SLC2A12Q8TD20 617 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 GEMIN6Q8WXD5 167 aaKnown RBP5.25□□□□□ -1.57
USF3-202ENST00000478658 SAMD8Q96LT4 415 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 NOX3Q9HBY0 568 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 SGK2Q9HBY8 427 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 TVP23BQ9NYZ1 205 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 MARCOQ9UEW3 520 aaPredicted RBP5.25□□□□□ -1.57
USF3-202ENST00000478658 WDR37Q9Y2I8 494 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 PLA2R1Q13018 1463 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 FAM237BA0A1B0GVD1 139 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 TMEM72A0PK05 275 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 KLRC4-KLRK1H3BQV0 150 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 RRP8O43159 456 aaKnown RBP5.25□□□□□ -1.57
USF3-202ENST00000478658 ZNF780AO75290 641 aaPredicted RBP5.25□□□□□ -1.57
USF3-202ENST00000478658 MTX2O75431 263 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 SLC22A3O75751 556 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 ZNF728P0DKX0 622 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 SCGB1C2P0DMR2 95 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 HLA-DOBP13765 273 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 RPL26P61254 145 aaKnown RBP5.25□□□□□ -1.57
USF3-202ENST00000478658 MEF2DQ14814 521 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 CDNFQ49AH0 187 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 OTOP3Q7RTS5 596 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 PXT1Q8NFP0 134 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 STEAP2Q8NFT2 490 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 OR5D18Q8NGL1 313 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 CITED4Q96RK1 184 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 HCAR1Q9BXC0 346 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 SLCO1B3Q9NPD5 702 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 C2orf42Q9NWW7 574 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 TUBE1Q9UJT0 475 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 GGT3PA6NGU5 568 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 NEURL1BA8MQ27 555 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 ZNF705FA8MVS1 300 aaPredicted RBP5.25□□□□□ -1.57
USF3-202ENST00000478658 K7EPI3 171 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 MAGEB4O15481 346 aaPredicted RBP5.25□□□□□ -1.57
USF3-202ENST00000478658 TNFSF12O43508 249 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 ZNF705DP0CH99 300 aaPredicted RBP5.25□□□□□ -1.57
USF3-202ENST00000478658 ZNF705BP0CI00 300 aaPredicted RBP5.25□□□□□ -1.57
USF3-202ENST00000478658 UBL4AP11441 157 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 IGFBP5P24593 272 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 AQP5P55064 265 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 AESQ08117 197 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 MINDY4Q4G0A6 757 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 NT5DC1Q5TFE4 455 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 MEDAGQ5VYS4 303 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 STEAP1BQ6NZ63 245 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 MOXD1Q6UVY6 613 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 IGFN1Q86VF2 1251 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 RGMAQ96B86 450 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 COPS8Q99627 209 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 VPS25Q9BRG1 176 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 IER2Q9BTL4 223 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 BTBD1Q9H0C5 482 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 SRMSQ9H3Y6 488 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 EPHX3Q9H6B9 360 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 DDX43Q9NXZ2 648 aaKnown RBP5.25□□□□□ -1.57
USF3-202ENST00000478658 SH2B3Q9UQQ2 575 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 ZNF536O15090 1300 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 MIA3Q5JRA6 1907 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 GABRR3A8MPY1 467 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 FFAR3O14843 346 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 AOC2O75106 756 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 SLC25A14O95258 325 aaPredicted RBP5.25□□□□□ -1.57
USF3-202ENST00000478658 CLDN9O95484 217 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 LGI1O95970 557 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 WNT11O96014 354 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 RHOQP17081 205 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 OAZ1P54368 228 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 HERVK_113P61574 105 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 PRDX4Q13162 271 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 ZC3H12AQ5D1E8 599 aaKnown RBP5.25□□□□□ -1.57
USF3-202ENST00000478658 RPL22L1Q6P5R6 122 aaKnown RBP5.25□□□□□ -1.57
USF3-202ENST00000478658 DBX2Q6ZNG2 339 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 COMMD7Q86VX2 200 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 TMEM139Q8IV31 216 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 RAVER1Q8IY67 606 aaKnown RBP5.25□□□□□ -1.57
USF3-202ENST00000478658 ZBTB2Q8N680 514 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 GJC3Q8NFK1 279 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 OR6N1Q8NGY5 312 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 GIMAP1Q8WWP7 306 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 LCN9Q8WX39 176 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 PYDC1Q8WXC3 89 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 CD180Q99467 661 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 DPH1Q9BZG8 443 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms